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Difference between revisions of "TSS:Hg 100744.1"

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Line 4: Line 4:
 
|cpg_percent=0.055
 
|cpg_percent=0.055
 
|distance=40
 
|distance=40
|distance_to_tss=-13706
+
|distance_to_tss=-13605
 
|end=37637366
 
|end=37637366
 
|end_of_center_position=37637350
 
|end_of_center_position=37637350
Line 12: Line 12:
 
|gene_description=FERM and PDZ domain containing 1
 
|gene_description=FERM and PDZ domain containing 1
 
|gene_id=
 
|gene_id=
|gene_name="RAB1C, member RAS oncogene family pseudogene"
+
|gene_name=RAB1C, member RAS oncogene family pseudogene
 
|gene_source=HGNC:23683
 
|gene_source=HGNC:23683
 
|gene_symbol=RAB1C
 
|gene_symbol=RAB1C

Revision as of 15:27, 15 June 2021

Basic information about the TSS


TSS ID:hg_100744.1
Species:human
Chr:chr9
TSS Classification:yes
Start:37637332
End:37637366
Strand:-
TSS Score:1
Start of the center position in the TSS region:37637349
End of the center position in the TSS region:37637350



Gene and protein annotation


Transcript_name:ENST00000409159.2
Distance:40
GeneID:
HGNC/MGI_ID:HGNC:23683
UniProt_ID:
Gene_name:RAB1C, member RAS oncogene family pseudogene
Gene_symbol:RAB1C
Gene_synonyms:
Gene_source:HGNC:23683



Transcript annotation


Transcript_name:ENST00000409159.2
Distance:40
Num_trans:2
All_trans:ENST00000409159.2:40 U66622:237



TATA-Box annotation


Distance to TSS:-13605
Nearest PromoterID:NM_014907
Entrez ID:22844
Nearest Unigene:Hs.163990
Nearest Refseq:NM_014907
Nearest Ensembl:ENSG00000070601
Gene Name:RAB1C, member RAS oncogene family pseudogene
Gene Alias:FRMD2
Gene Description:FERM and PDZ domain containing 1
Gene Type:protein-coding
CpG%:0.055
GC%:0.467662
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):