Difference between revisions of "TSS:Hg 100764.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000377707.4:0 NM_003028:0 BC094765:0 X75342:3 BC136581:128 BC136582:128 BC029953:496 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-15 |
|end=38069270 | |end=38069270 | ||
|end_of_center_position=38069242 | |end_of_center_position=38069242 | ||
| Line 12: | Line 12: | ||
|gene_description=SH2 domain containing adaptor protein B | |gene_description=SH2 domain containing adaptor protein B | ||
|gene_id=6461 | |gene_id=6461 | ||
| − | |gene_name= | + | |gene_name=SH2 domain containing adaptor protein B |
|gene_source=HGNC:10838 | |gene_source=HGNC:10838 | ||
|gene_symbol=SHB | |gene_symbol=SHB | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_003028 | |nearest_refseq=NM_003028 | ||
|nearest_unigene=Hs.521482 | |nearest_unigene=Hs.521482 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=38069213 | |start=38069213 | ||
|start_of_center_position=38069241 | |start_of_center_position=38069241 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=BC094765 | + | |transcript_name=ENST00000377707.4 NM_003028 BC094765 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100764.1 | |tss_id=hg_100764.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q15464 |
}} | }} | ||
Revision as of 15:27, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 38069241 |
|---|---|
| End of the center position in the TSS region: | 38069242 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000377707.4 NM_003028 BC094765 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000377707.4:0 NM_003028:0 BC094765:0 X75342:3 BC136581:128 BC136582:128 BC029953:496 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NM_003028 |
| Entrez ID: | 6461 |
| Nearest Unigene: | Hs.521482 |
| Nearest Refseq: | NM_003028 |
| Nearest Ensembl: | ENSG00000107338 |
| Gene Name: | SH2 domain containing adaptor protein B |
| Gene Alias: | bA3J10.2 |
| Gene Description: | SH2 domain containing adaptor protein B |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.845771 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
