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Difference between revisions of "TSS:Mm 9995.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000067976.8:-79 NM_144880:-79 uc007eci.1:-79 AK145397:-79 BC059026:-79
+
|all_trans=ENSMUST00000067976.8:-79 NM_144880:-79 AK145397:-79 BC059026:-79
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 10: Line 10:
 
|gc_percent=0.706468
 
|gc_percent=0.706468
 
|gene_alias=PR61alpha
 
|gene_alias=PR61alpha
|gene_description="protein phosphatase 2, regulatory subunit B', alpha"
+
|gene_description=protein phosphatase 2, regulatory subunit B', alpha
 
|gene_id=226849
 
|gene_id=226849
|gene_name="protein phosphatase 2, regulatory subunit B', alpha"
+
|gene_name=protein phosphatase 2, regulatory subunit B', alpha
 
|gene_source=MGI:2388479
 
|gene_source=MGI:2388479
 
|gene_symbol=Ppp2r5a
 
|gene_symbol=Ppp2r5a
Line 22: Line 22:
 
|nearest_refseq=NM_144880
 
|nearest_refseq=NM_144880
 
|nearest_unigene=Mm.205569
 
|nearest_unigene=Mm.205569
|num_trans=5
+
|num_trans=4
 
|species=mouse
 
|species=mouse
 
|start=191396922
 
|start=191396922
 
|start_of_center_position=191396942
 
|start_of_center_position=191396942
 
|strand=-
 
|strand=-
|transcript_name=ENSMUST00000067976.8 NM_144880 uc007eci.1 AK145397 BC059026
+
|transcript_name=ENSMUST00000067976.8 NM_144880 AK145397 BC059026
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_9995.1
 
|tss_id=mm_9995.1

Revision as of 04:03, 22 June 2021

Basic information about the TSS


TSS ID:mm_9995.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:191396922
End:191396962
Strand:-
TSS Score:1
Start of the center position in the TSS region:191396942
End of the center position in the TSS region:191396943



Gene and protein annotation


Transcript_name:ENSMUST00000067976.8 NM_144880 AK145397 BC059026
Distance:-79
GeneID:226849
HGNC/MGI_ID:MGI:2388479
UniProt_ID:Q3ULN8 Q6PD03
Gene_name:protein phosphatase 2, regulatory subunit B', alpha
Gene_symbol:Ppp2r5a
Gene_synonyms:
Gene_source:MGI:2388479



Transcript annotation


Transcript_name:ENSMUST00000067976.8 NM_144880 AK145397 BC059026
Distance:-79
Num_trans:4
All_trans:ENSMUST00000067976.8:-79 NM_144880:-79 AK145397:-79 BC059026:-79



TATA-Box annotation


Distance to TSS:99
Nearest PromoterID:NM_144880
Entrez ID:226849
Nearest Unigene:Mm.205569
Nearest Refseq:NM_144880
Nearest Ensembl:ENSMUSG00000026626
Gene Name:protein phosphatase 2, regulatory subunit B', alpha
Gene Alias:PR61alpha
Gene Description:protein phosphatase 2, regulatory subunit B', alpha
Gene Type:protein-coding
CpG%:0.105
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):