Difference between revisions of "TSS:Mm 10000.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000192778.1:276 AK159006:276 | + | |all_trans=ENSMUST00000192778.1:276 NR_151615:276 AK159006:276 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=276 | |distance=276 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-285 |
|end=191465343 | |end=191465343 | ||
|end_of_center_position=191465334 | |end_of_center_position=191465334 | ||
| − | |entrez_id= | + | |entrez_id=102634668 |
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=predicted gene, 32200 |
|gene_id=102634668 | |gene_id=102634668 | ||
| − | |gene_name= | + | |gene_name=predicted gene, 32200 |
|gene_source=MGI:5591359 | |gene_source=MGI:5591359 | ||
|gene_symbol=Gm32200 | |gene_symbol=Gm32200 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=MGI:5591359 | |hgnc_mgi_id=MGI:5591359 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_151615 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_151615 |
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=191465323 | |start=191465323 | ||
|start_of_center_position=191465333 | |start_of_center_position=191465333 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000192778.1 AK159006 | + | |transcript_name=ENSMUST00000192778.1 NR_151615 AK159006 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_10000.1 | |tss_id=mm_10000.1 | ||
Revision as of 16:06, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 191465333 |
|---|---|
| End of the center position in the TSS region: | 191465334 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000192778.1 NR_151615 AK159006 |
|---|---|
| Distance: | 276 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000192778.1:276 NR_151615:276 AK159006:276 |
TATA-Box annotation
| Distance to TSS: | -285 |
|---|---|
| Nearest PromoterID: | NR_151615 |
| Entrez ID: | 102634668 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_151615 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene, 32200 |
| Gene Alias: | - |
| Gene Description: | predicted gene, 32200 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
