Difference between revisions of "TSS:Hg 27442.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000447619.5:0 | + | |all_trans=ENST00000447619.5:0 ENST00000456793.2:0 ENST00000429985.1:0 NM_001134693:0 BC105283:0 AL049447:8 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=27071674 | |end=27071674 | ||
|end_of_center_position=27071654 | |end_of_center_position=27071654 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=oligosaccharyltransferase complex subunit 4, non-catalytic |
|gene_id=100128731 | |gene_id=100128731 | ||
| − | |gene_name= | + | |gene_name=oligosaccharyltransferase complex subunit 4, non-catalytic |
|gene_source=HGNC:32483 | |gene_source=HGNC:32483 | ||
|gene_symbol=OST4 | |gene_symbol=OST4 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001134693 | |nearest_refseq=NM_001134693 | ||
|nearest_unigene=Hs.502948 | |nearest_unigene=Hs.502948 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=27071632 | |start=27071632 | ||
|start_of_center_position=27071653 | |start_of_center_position=27071653 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000447619.5 ENST00000429985.1 | + | |transcript_name=ENST00000447619.5 ENST00000456793.2 ENST00000429985.1 NM_001134693 BC105283 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_27442.1 | |tss_id=hg_27442.1 | ||
Revision as of 18:12, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27071653 |
|---|---|
| End of the center position in the TSS region: | 27071654 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000447619.5 ENST00000456793.2 ENST00000429985.1 NM_001134693 BC105283 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000447619.5:0 ENST00000456793.2:0 ENST00000429985.1:0 NM_001134693:0 BC105283:0 AL049447:8 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001134693 |
| Entrez ID: | 100128731 |
| Nearest Unigene: | Hs.502948 |
| Nearest Refseq: | NM_001134693 |
| Nearest Ensembl: | ENSG00000228474 |
| Gene Name: | oligosaccharyltransferase complex subunit 4, non-catalytic |
| Gene Alias: | - |
| Gene Description: | oligosaccharyltransferase complex subunit 4, non-catalytic |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
