Difference between revisions of "TSS:Hg 100860.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|BTEB1= | |BTEB1= | ||
| + | |all_trans=LF211282:168 MA446859:168 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=168 |
|distance_to_tss=-5411 | |distance_to_tss=-5411 | ||
|end=70420080 | |end=70420080 | ||
| Line 9: | Line 10: | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=BTEB | + | |gene_alias=BTEB|BTEB1 |
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
|gene_name=KLF9 | |gene_name=KLF9 | ||
| Line 17: | Line 18: | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=70420056 | |start=70420056 | ||
|start_of_center_position=70420068 | |start_of_center_position=70420068 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF211282 MA446859 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100860.1 | |tss_id=hg_100860.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Revision as of 15:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70420068 |
|---|---|
| End of the center position in the TSS region: | 70420069 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF211282 MA446859 |
|---|---|
| Distance: | 168 |
| Num_trans: | 2 |
| All_trans: | LF211282:168 MA446859:168 |
TATA-Box annotation
| Distance to TSS: | -5411 |
|---|---|
| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | KLF9 |
| Gene Alias: | BTEB |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
