Difference between revisions of "TSS:Hg 100887.1"
From referenceTSS
| Line 2: | Line 2: | ||
|LTRPC3= | |LTRPC3= | ||
|MLSN2= | |MLSN2= | ||
| − | |all_trans=BC142972:4 ENST00000377105.5:19 | + | |all_trans=BC142972:4 ENST00000360823.6:19 ENST00000377105.5:19 ENST00000377101.5:25 NM_020952:25 NM_001366154:25 NM_206944:25 NM_206945:25 NM_206946:25 NM_024971:25 NM_206947:25 NM_001007470:25 NM_206948:25 BC094699:25 AK225732:28 AK021788:29 ENST00000677594.1:-48 ENST00000361823.9:48 AF325212:48 ENST00000396283.5:54 BC067733:59 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=4 | |distance=4 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-30 |
|end=70869087 | |end=70869087 | ||
|end_of_center_position=70869082 | |end_of_center_position=70869082 | ||
|entrez_id=80036 | |entrez_id=80036 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=GON-2 | + | |gene_alias=GON-2|LTRPC3|MLSN2 |
|gene_description=transient receptor potential cation channel subfamily M member 3 | |gene_description=transient receptor potential cation channel subfamily M member 3 | ||
|gene_id=80036 | |gene_id=80036 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:17992 | |hgnc_mgi_id=HGNC:17992 | ||
|nearest_ensembl=ENSG00000083067 | |nearest_ensembl=ENSG00000083067 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_206948 |
|nearest_refseq=NM_020952 | |nearest_refseq=NM_020952 | ||
|nearest_unigene=Hs.47288 | |nearest_unigene=Hs.47288 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=70869076 | |start=70869076 | ||
Revision as of 15:30, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70869081 |
|---|---|
| End of the center position in the TSS region: | 70869082 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC142972 |
|---|---|
| Distance: | 4 |
| Num_trans: | 21 |
| All_trans: | BC142972:4 ENST00000360823.6:19 ENST00000377105.5:19 ENST00000377101.5:25 NM_020952:25 NM_001366154:25 NM_206944:25 NM_206945:25 NM_206946:25 NM_024971:25 NM_206947:25 NM_001007470:25 NM_206948:25 BC094699:25 AK225732:28 AK021788:29 ENST00000677594.1:-48 ENST00000361823.9:48 AF325212:48 ENST00000396283.5:54 BC067733:59 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_206948 |
| Entrez ID: | 80036 |
| Nearest Unigene: | Hs.47288 |
| Nearest Refseq: | NM_020952 |
| Nearest Ensembl: | ENSG00000083067 |
| Gene Name: | transient receptor potential cation channel subfamily M member 3 |
| Gene Alias: | GON-2 |
| Gene Description: | transient receptor potential cation channel subfamily M member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
