Difference between revisions of "TSS:Hg 101040.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC007069:0 BC015473:23 | + | |all_trans=ENST00000376736.6:0 NM_018339:0 BC007069:0 BC015473:23 AK002011:-43 ENST00000472900.5:-55 ENST00000479197.1:-55 AK315734:-55 AK307079:-55 KJ899117:180 KJ905495:180 ENST00000490113.1:241 ENST00000483155.5:416 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=9 |
|end=76394462 | |end=76394462 | ||
|end_of_center_position=76394418 | |end_of_center_position=76394418 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018339 | |nearest_refseq=NM_018339 | ||
|nearest_unigene=Hs.37558 | |nearest_unigene=Hs.37558 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=76394372 | |start=76394372 | ||
|start_of_center_position=76394417 | |start_of_center_position=76394417 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=BC007069 | + | |transcript_name=ENST00000376736.6 NM_018339 BC007069 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101040.1 | |tss_id=hg_101040.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q969G6 |
}} | }} | ||
Revision as of 15:34, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 76394417 |
|---|---|
| End of the center position in the TSS region: | 76394418 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376736.6 NM_018339 BC007069 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000376736.6:0 NM_018339:0 BC007069:0 BC015473:23 AK002011:-43 ENST00000472900.5:-55 ENST00000479197.1:-55 AK315734:-55 AK307079:-55 KJ899117:180 KJ905495:180 ENST00000490113.1:241 ENST00000483155.5:416 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_018339 |
| Entrez ID: | 55312 |
| Nearest Unigene: | Hs.37558 |
| Nearest Refseq: | NM_018339 |
| Nearest Ensembl: | ENSG00000135002 |
| Gene Name: | riboflavin kinase |
| Gene Alias: | RIFK |
| Gene Description: | riboflavin kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
