Difference between revisions of "TSS:Hg 101149.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC010066:-22 ENST00000257468.11 | + | |all_trans=BC010066:-22 ENST00000257468.11:-23 AK027576:-32 BC039294:-33 BC017289:-33 AK027556:-41 AL136643:-46 ENST00000376395.9:-47 NM_013438:-47 NM_053067:-47 AB035275:106 HM005532:181 AB528730:212 AF176069:215 AF293384:215 LF331823:253 MA567400:253 AK074535:-292 ENST00000529923.1:293 LF384925:-342 MA620502:-342 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=-22 | |distance=-22 | ||
| − | |distance_to_tss= | + | |distance_to_tss=56 |
|end=83707911 | |end=83707911 | ||
|end_of_center_position=83707903 | |end_of_center_position=83707903 | ||
| − | |entrez_id= | + | |entrez_id=29979 |
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=- | + | |gene_alias=DA41{{!}}DSK2{{!}}PLIC-1{{!}}UBQN{{!}}XDRP1 |
| − | |gene_description= | + | |gene_description=ubiquilin 1 |
|gene_id=29979 | |gene_id=29979 | ||
|gene_name=ubiquilin 1 | |gene_name=ubiquilin 1 | ||
| Line 16: | Line 16: | ||
|gene_symbol=UBQLN1 | |gene_symbol=UBQLN1 | ||
|gene_synonyms=DA41 DSK2 PLIC-1 XDRP1 | |gene_synonyms=DA41 DSK2 PLIC-1 XDRP1 | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:12508 | |hgnc_mgi_id=HGNC:12508 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000135018 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_013438 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_013438 |
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=83707893 | |start=83707893 | ||
Revision as of 16:33, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 83707902 |
|---|---|
| End of the center position in the TSS region: | 83707903 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC010066 |
|---|---|
| Distance: | -22 |
| Num_trans: | 21 |
| All_trans: | BC010066:-22 ENST00000257468.11:-23 AK027576:-32 BC039294:-33 BC017289:-33 AK027556:-41 AL136643:-46 ENST00000376395.9:-47 NM_013438:-47 NM_053067:-47 AB035275:106 HM005532:181 AB528730:212 AF176069:215 AF293384:215 LF331823:253 MA567400:253 AK074535:-292 ENST00000529923.1:293 LF384925:-342 MA620502:-342 |
TATA-Box annotation
| Distance to TSS: | 56 |
|---|---|
| Nearest PromoterID: | NM_013438 |
| Entrez ID: | 29979 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NM_013438 |
| Nearest Ensembl: | ENSG00000135018 |
| Gene Name: | ubiquilin 1 |
| Gene Alias: | DA41|DSK2|PLIC-1|UBQN|XDRP1 |
| Gene Description: | ubiquilin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
