Difference between revisions of "TSS:Hg 101200.1"
From referenceTSS
| Line 4: | Line 4: | ||
|HEL46= | |HEL46= | ||
|PSEC0257= | |PSEC0257= | ||
| − | |all_trans=ENST00000388712.7:0 | + | |all_trans=ENST00000388712.7:0 NM_016548:0 BC001740:0 AF236056:0 AK075542:0 AK027717:0 AY358593:7 |
|bA379P1.3= | |bA379P1.3= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.2 | |cpg_percent=0.2 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=9 |
|end=86099591 | |end=86099591 | ||
|end_of_center_position=86099549 | |end_of_center_position=86099549 | ||
|entrez_id=51280 | |entrez_id=51280 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=C9orf155 | + | |gene_alias=C9orf155{{!}}GOLPH2{{!}}GP73{{!}}HEL46{{!}}PSEC0257{{!}}bA379P1.3 |
|gene_description=golgi membrane protein 1 | |gene_description=golgi membrane protein 1 | ||
|gene_id=51280 | |gene_id=51280 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_016548 | |nearest_refseq=NM_016548 | ||
|nearest_unigene=Hs.494337 | |nearest_unigene=Hs.494337 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=86099506 | |start=86099506 | ||
|start_of_center_position=86099548 | |start_of_center_position=86099548 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000388712.7 | + | |transcript_name=ENST00000388712.7 NM_016548 BC001740 AF236056 AK075542 AK027717 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101200.1 | |tss_id=hg_101200.1 | ||
Revision as of 16:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86099548 |
|---|---|
| End of the center position in the TSS region: | 86099549 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000388712.7 NM_016548 BC001740 AF236056 AK075542 AK027717 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000388712.7:0 NM_016548:0 BC001740:0 AF236056:0 AK075542:0 AK027717:0 AY358593:7 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_016548 |
| Entrez ID: | 51280 |
| Nearest Unigene: | Hs.494337 |
| Nearest Refseq: | NM_016548 |
| Nearest Ensembl: | ENSG00000135052 |
| Gene Name: | golgi membrane protein 1 |
| Gene Alias: | C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 |
| Gene Description: | golgi membrane protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.2 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
