Difference between revisions of "TSS:Hg 101222.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-14707 |
|end=86369122 | |end=86369122 | ||
|end_of_center_position=86369117 | |end_of_center_position=86369117 | ||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=PAPD6 | + | |gene_alias=PAPD6{{!}}TENT3B{{!}}ZCCHC6 |
| − | |gene_description= | + | |gene_description=terminal uridylyl transferase 7 |
| − | |gene_name= | + | |gene_name=TUT7 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000083223 | |nearest_ensembl=ENSG00000083223 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_024617 |
|nearest_refseq=NM_024617 | |nearest_refseq=NM_024617 | ||
|nearest_unigene=Hs.597057 | |nearest_unigene=Hs.597057 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=86369116 | |start_of_center_position=86369116 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(CTCCTTAAAAAC,-,0.00),-33(CCTTAAAAACCC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86369116 |
|---|---|
| End of the center position in the TSS region: | 86369117 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -14707 |
|---|---|
| Nearest PromoterID: | NM_024617 |
| Entrez ID: | 79670 |
| Nearest Unigene: | Hs.597057 |
| Nearest Refseq: | NM_024617 |
| Nearest Ensembl: | ENSG00000083223 |
| Gene Name: | TUT7 |
| Gene Alias: | PAPD6|TENT3B|ZCCHC6 |
| Gene Description: | terminal uridylyl transferase 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CTCCTTAAAAAC,-,0.00),-33(CCTTAAAAACCC,+,0.00) |
