Difference between revisions of "TSS:Hg 101226.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=L13698:-90 BC132682:189 BC136586:189 BC074809:232 BC074908:232 ENST00000298743.9:-407 NM_002048:-407 LF214003:-407 MA449580:-407 LF331851:474 MA567428:474 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=-90 | |distance=-90 | ||
| − | |distance_to_tss= | + | |distance_to_tss=430 |
|end=86947099 | |end=86947099 | ||
|end_of_center_position=86947076 | |end_of_center_position=86947076 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_002048 | |nearest_refseq=NM_002048 | ||
|nearest_unigene=Hs.65029 | |nearest_unigene=Hs.65029 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=86947052 | |start=86947052 | ||
|start_of_center_position=86947075 | |start_of_center_position=86947075 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=L13698 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101226.1 | |tss_id=hg_101226.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86947075 |
|---|---|
| End of the center position in the TSS region: | 86947076 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | L13698 |
|---|---|
| Distance: | -90 |
| Num_trans: | 11 |
| All_trans: | L13698:-90 BC132682:189 BC136586:189 BC074809:232 BC074908:232 ENST00000298743.9:-407 NM_002048:-407 LF214003:-407 MA449580:-407 LF331851:474 MA567428:474 |
TATA-Box annotation
| Distance to TSS: | 430 |
|---|---|
| Nearest PromoterID: | NM_002048 |
| Entrez ID: | 2619 |
| Nearest Unigene: | Hs.65029 |
| Nearest Refseq: | NM_002048 |
| Nearest Ensembl: | ENSG00000180447 |
| Gene Name: | growth arrest specific 1 |
| Gene Alias: | - |
| Gene Description: | growth arrest specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
