Difference between revisions of "TSS:Hg 101283.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RAI= | |RAI= | ||
|SHCC= | |SHCC= | ||
| − | |all_trans=ENST00000375835. | + | |all_trans=ENST00000375835.9:255 NM_016848:255 BC026314:306 D84361:433 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=255 |
| − | |distance_to_tss=- | + | |distance_to_tss=-287 |
|end=89179137 | |end=89179137 | ||
|end_of_center_position=89179105 | |end_of_center_position=89179105 | ||
|entrez_id=53358 | |entrez_id=53358 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=N-Shc | + | |gene_alias=N-Shc{{!}}NSHC{{!}}RAI{{!}}SHCC |
|gene_description=SHC adaptor protein 3 | |gene_description=SHC adaptor protein 3 | ||
|gene_id=53358 | |gene_id=53358 | ||
| − | |gene_name=SHC | + | |gene_name=SHC adaptor protein 3 |
|gene_source=HGNC:18181 | |gene_source=HGNC:18181 | ||
|gene_symbol=SHC3 | |gene_symbol=SHC3 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_016848 | |nearest_refseq=NM_016848 | ||
|nearest_unigene=Hs.292737 | |nearest_unigene=Hs.292737 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=89179072 | |start=89179072 | ||
|start_of_center_position=89179104 | |start_of_center_position=89179104 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-47(TCTTAAAAAGCC,+,0.00) |
| − | |transcript_name=ENST00000375835. | + | |transcript_name=ENST00000375835.9 NM_016848 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101283.1 | |tss_id=hg_101283.1 | ||
Revision as of 16:36, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89179104 |
|---|---|
| End of the center position in the TSS region: | 89179105 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375835.9 NM_016848 |
|---|---|
| Distance: | 255 |
| Num_trans: | 4 |
| All_trans: | ENST00000375835.9:255 NM_016848:255 BC026314:306 D84361:433 |
TATA-Box annotation
| Distance to TSS: | -287 |
|---|---|
| Nearest PromoterID: | NM_016848 |
| Entrez ID: | 53358 |
| Nearest Unigene: | Hs.292737 |
| Nearest Refseq: | NM_016848 |
| Nearest Ensembl: | ENSG00000148082 |
| Gene Name: | SHC adaptor protein 3 |
| Gene Alias: | N-Shc|NSHC|RAI|SHCC |
| Gene Description: | SHC adaptor protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -47(TCTTAAAAAGCC,+,0.00) |
