Difference between revisions of "TSS:Hg 101323.1"
From referenceTSS
| Line 3: | Line 3: | ||
|M-sema-G= | |M-sema-G= | ||
|SEMAJ= | |SEMAJ= | ||
| − | |all_trans=ENST00000418828 | + | |all_trans=ENST00000418828.1:-54 ENST00000420681.6:-74 ENST00000482128.1:-169 |
|chr=chr9 | |chr=chr9 | ||
|coll-4= | |coll-4= | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=-54 | |distance=-54 | ||
| − | |distance_to_tss= | + | |distance_to_tss=43486 |
|end=89436409 | |end=89436409 | ||
|end_of_center_position=89436404 | |end_of_center_position=89436404 | ||
| − | |entrez_id= | + | |entrez_id=NA |
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias= | + | |gene_alias= |
| − | |gene_description= | + | |gene_description= |
|gene_id=10507 | |gene_id=10507 | ||
|gene_name=semaphorin 4D | |gene_name=semaphorin 4D | ||
| Line 20: | Line 20: | ||
|gene_symbol=SEMA4D | |gene_symbol=SEMA4D | ||
|gene_synonyms=CD100 FLJ39737 coll-4 | |gene_synonyms=CD100 FLJ39737 coll-4 | ||
| − | |gene_type= | + | |gene_type= |
|hgnc_mgi_id=HGNC:10732 | |hgnc_mgi_id=HGNC:10732 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_163885 |
| − | |nearest_refseq= | + | |nearest_refseq= |
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=89436398 | |start=89436398 | ||
|start_of_center_position=89436403 | |start_of_center_position=89436403 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000418828 | + | |transcript_name=ENST00000418828.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101323.1 | |tss_id=hg_101323.1 | ||
Revision as of 16:37, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89436403 |
|---|---|
| End of the center position in the TSS region: | 89436404 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000418828.1 |
|---|---|
| Distance: | -54 |
| Num_trans: | 3 |
| All_trans: | ENST00000418828.1:-54 ENST00000420681.6:-74 ENST00000482128.1:-169 |
TATA-Box annotation
| Distance to TSS: | 43486 |
|---|---|
| Nearest PromoterID: | NR_163885 |
| Entrez ID: | NA |
| Nearest Unigene: | |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | semaphorin 4D |
| Gene Alias: | |
| Gene Description: | |
| Gene Type: | |
| CpG%: | 0.035 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
