Difference between revisions of "TSS:Hg 97331.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000439438.1:-139 NR_135306 | + | |all_trans=ENST00000668360.1:0 ENST00000439438.1:-139 NR_135306:-139 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=146 | |distance_to_tss=146 | ||
|end=91119215 | |end=91119215 | ||
| Line 13: | Line 13: | ||
|gene_id=100129347 | |gene_id=100129347 | ||
|gene_name=long intergenic non-protein coding RNA 484 | |gene_name=long intergenic non-protein coding RNA 484 | ||
| − | |gene_source= | + | |gene_source=EntrezGene:100129347 |
|gene_symbol=LINC00484 | |gene_symbol=LINC00484 | ||
| − | |gene_synonyms= | + | |gene_synonyms=C9orf73 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id= |
|nearest_ensembl=ENSG00000229694 | |nearest_ensembl=ENSG00000229694 | ||
|nearest_promoter_id=NR_135306 | |nearest_promoter_id=NR_135306 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=91119207 | |start_of_center_position=91119207 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000668360.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_97331.1 | |tss_id=hg_97331.1 | ||
Revision as of 21:15, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91119207 |
|---|---|
| End of the center position in the TSS region: | 91119208 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000668360.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000668360.1:0 ENST00000439438.1:-139 NR_135306:-139 |
TATA-Box annotation
| Distance to TSS: | 146 |
|---|---|
| Nearest PromoterID: | NR_135306 |
| Entrez ID: | 100129347 |
| Nearest Unigene: | Hs.522287 |
| Nearest Refseq: | NR_135306 |
| Nearest Ensembl: | ENSG00000229694 |
| Gene Name: | long intergenic non-protein coding RNA 484 |
| Gene Alias: | C9orf73 |
| Gene Description: | long intergenic non-protein coding RNA 484 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
