Difference between revisions of "TSS:Hg 101413.1"
From referenceTSS
| Line 5: | Line 5: | ||
|IRS= | |IRS= | ||
|PRO0785= | |PRO0785= | ||
| − | |all_trans=AB209234:0 D28473:-5 ENST00000430417 | + | |all_trans=AB209234:0 D28473:-5 ENST00000430417.1:9 AK293014:-14 U04953:-16 BX647236:-19 BX647430:-21 AK308202:-21 BX537417:-25 ENST00000627121.3:-26 BX647071:-26 BX648567:-26 BX537429:-26 BX538109:-26 ENST00000443024.7:-28 NM_001378586:-28 NM_001378584:-28 NM_001378574:-28 NM_001378575:-28 NM_002161:-28 NM_001378583:-28 NR_073446:-28 NM_001378576:-28 NM_001378579:-28 NM_001378585:-28 NM_013417:-28 NM_001378580:-28 NM_001378582:-28 NM_001378578:-28 NM_001378577:-28 NM_001378569:-28 NM_001378571:-28 NM_001378572:-28 NM_001378573:-28 NM_001374299:-28 NM_001374301:-28 NM_001374300:-28 ENST00000375643.7:-31 AK301272:-37 ENST00000490438.1:-47 ENST00000447699.7:-87 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 14: | Line 14: | ||
|entrez_id=3376 | |entrez_id=3376 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=GRIDHH | + | |gene_alias=GRIDHH{{!}}IARS1{{!}}ILERS{{!}}ILRS{{!}}IRS{{!}}PRO0785 |
|gene_description=isoleucyl-tRNA synthetase | |gene_description=isoleucyl-tRNA synthetase | ||
|gene_id=3376 | |gene_id=3376 | ||
| − | |gene_name=isoleucyl-tRNA synthetase | + | |gene_name=isoleucyl-tRNA synthetase 1 |
|gene_source=HGNC:5330 | |gene_source=HGNC:5330 | ||
| − | |gene_symbol= | + | |gene_symbol=IARS1 |
| − | |gene_synonyms= | + | |gene_synonyms=ILRS |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5330 | |hgnc_mgi_id=HGNC:5330 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_002161 | |nearest_refseq=NM_002161 | ||
|nearest_unigene=Hs.445403 | |nearest_unigene=Hs.445403 | ||
| − | |num_trans= | + | |num_trans=41 |
|species=human | |species=human | ||
|start=92293649 | |start=92293649 | ||
Revision as of 16:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92293659 |
|---|---|
| End of the center position in the TSS region: | 92293660 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB209234 |
|---|---|
| Distance: | 0 |
| Num_trans: | 41 |
| All_trans: | AB209234:0 D28473:-5 ENST00000430417.1:9 AK293014:-14 U04953:-16 BX647236:-19 BX647430:-21 AK308202:-21 BX537417:-25 ENST00000627121.3:-26 BX647071:-26 BX648567:-26 BX537429:-26 BX538109:-26 ENST00000443024.7:-28 NM_001378586:-28 NM_001378584:-28 NM_001378574:-28 NM_001378575:-28 NM_002161:-28 NM_001378583:-28 NR_073446:-28 NM_001378576:-28 NM_001378579:-28 NM_001378585:-28 NM_013417:-28 NM_001378580:-28 NM_001378582:-28 NM_001378578:-28 NM_001378577:-28 NM_001378569:-28 NM_001378571:-28 NM_001378572:-28 NM_001378573:-28 NM_001374299:-28 NM_001374301:-28 NM_001374300:-28 ENST00000375643.7:-31 AK301272:-37 ENST00000490438.1:-47 ENST00000447699.7:-87 |
TATA-Box annotation
| Distance to TSS: | 97 |
|---|---|
| Nearest PromoterID: | NM_013417 |
| Entrez ID: | 3376 |
| Nearest Unigene: | Hs.445403 |
| Nearest Refseq: | NM_002161 |
| Nearest Ensembl: | ENSG00000196305 |
| Gene Name: | isoleucyl-tRNA synthetase 1 |
| Gene Alias: | GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 |
| Gene Description: | isoleucyl-tRNA synthetase |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
