Difference between revisions of "TSS:Hg 101423.1"
From referenceTSS
| Line 2: | Line 2: | ||
|OIF= | |OIF= | ||
|SLRR3A= | |SLRR3A= | ||
| − | |all_trans=ENST00000375561. | + | |all_trans=ENST00000375561.10:10 NM_014057:10 ENST00000262551.8:29 AF086912:42 AF100758:42 ENST00000447356.1:-104 AK289628:-104 NM_033014:-107 NM_024416:-107 AK295433:-107 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=10 |
| − | |distance_to_tss= | + | |distance_to_tss=-12 |
|end=92404592 | |end=92404592 | ||
|end_of_center_position=92404590 | |end_of_center_position=92404590 | ||
|entrez_id=4969 | |entrez_id=4969 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=OG | + | |gene_alias=OG{{!}}OIF{{!}}SLRR3A |
|gene_description=osteoglycin | |gene_description=osteoglycin | ||
|gene_id=4969 | |gene_id=4969 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_014057 | |nearest_refseq=NM_014057 | ||
|nearest_unigene=Hs.109439 | |nearest_unigene=Hs.109439 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=92404587 | |start=92404587 | ||
|start_of_center_position=92404589 | |start_of_center_position=92404589 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000375561. | + | |transcript_name=ENST00000375561.10 NM_014057 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101423.1 | |tss_id=hg_101423.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A8K0R3 | + | |uniprot_id=A8K0R3 Q7Z532 |
}} | }} | ||
Revision as of 16:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92404589 |
|---|---|
| End of the center position in the TSS region: | 92404590 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375561.10 NM_014057 |
|---|---|
| Distance: | 10 |
| Num_trans: | 10 |
| All_trans: | ENST00000375561.10:10 NM_014057:10 ENST00000262551.8:29 AF086912:42 AF100758:42 ENST00000447356.1:-104 AK289628:-104 NM_033014:-107 NM_024416:-107 AK295433:-107 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_014057 |
| Entrez ID: | 4969 |
| Nearest Unigene: | Hs.109439 |
| Nearest Refseq: | NM_014057 |
| Nearest Ensembl: | ENSG00000106809 |
| Gene Name: | osteoglycin |
| Gene Alias: | OG|OIF|SLRR3A |
| Gene Description: | osteoglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
