Difference between revisions of "TSS:Hg 101491.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NR_166069:0 ENST00000648864.1:-67 ENST00000649569.1:139 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-16 |
|end=93346347 | |end=93346347 | ||
|end_of_center_position=93346319 | |end_of_center_position=93346319 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:31116 | |hgnc_mgi_id=HGNC:31116 | ||
|nearest_ensembl=ENSG00000204352 | |nearest_ensembl=ENSG00000204352 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368813 |
|nearest_refseq=NM_001098808 | |nearest_refseq=NM_001098808 | ||
|nearest_unigene=Hs.575636 | |nearest_unigene=Hs.575636 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=93346318 | |start_of_center_position=93346318 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NR_166069 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101491.1 | |tss_id=hg_101491.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:41, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 93346318 |
|---|---|
| End of the center position in the TSS region: | 93346319 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_166069 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | NR_166069:0 ENST00000648864.1:-67 ENST00000649569.1:139 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_001368813 |
| Entrez ID: | 445577 |
| Nearest Unigene: | Hs.575636 |
| Nearest Refseq: | NM_001098808 |
| Nearest Ensembl: | ENSG00000204352 |
| Gene Name: | chromosome 9 open reading frame 129 |
| Gene Alias: | bA165J3.3 |
| Gene Description: | chromosome 9 open reading frame 129 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
