Difference between revisions of "TSS:Hg 101501.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000375412. | + | |all_trans=ENST00000375412.11:0 NR_136231:0 NM_198841:0 NR_136229:0 NR_136230:0 AK056096:0 ENST00000483149.6:284 ENST00000520470.5:284 BC107135:284 BC107136:284 BC113074:284 AK309269:387 DQ599685:414 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=8 |
|end=93453606 | |end=93453606 | ||
|end_of_center_position=93453574 | |end_of_center_position=93453574 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23389 | |hgnc_mgi_id=HGNC:23389 | ||
|nearest_ensembl=ENSG00000188938 | |nearest_ensembl=ENSG00000188938 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_136231 |
|nearest_refseq=NM_198841 | |nearest_refseq=NM_198841 | ||
|nearest_unigene=Hs.350364 | |nearest_unigene=Hs.350364 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=93453573 | |start_of_center_position=93453573 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000375412. | + | |transcript_name=ENST00000375412.11 NR_136231 NM_198841 NR_136229 NR_136230 AK056096 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101501.1 | |tss_id=hg_101501.1 | ||
Revision as of 16:41, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 93453573 |
|---|---|
| End of the center position in the TSS region: | 93453574 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375412.11 NR_136231 NM_198841 NR_136229 NR_136230 AK056096 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000375412.11:0 NR_136231:0 NM_198841:0 NR_136229:0 NR_136230:0 AK056096:0 ENST00000483149.6:284 ENST00000520470.5:284 BC107135:284 BC107136:284 BC113074:284 AK309269:387 DQ599685:414 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NR_136231 |
| Entrez ID: | 158293 |
| Nearest Unigene: | Hs.350364 |
| Nearest Refseq: | NM_198841 |
| Nearest Ensembl: | ENSG00000188938 |
| Gene Name: | family with sequence similarity 120A opposite strand |
| Gene Alias: | C9orf10OS |
| Gene Description: | family with sequence similarity 120A opposite strand |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
