Difference between revisions of "TSS:Hg 101604.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Cdc14B1= | |Cdc14B1= | ||
|Cdc14B2= | |Cdc14B2= | ||
| − | |all_trans=ENST00000463569.5 | + | |all_trans=ENST00000463569.5:64 BC156666:84 AB590751:84 ENST00000375240.7:86 AF023158:86 EF611343:86 ENST00000412285.6:101 AK225361:101 ENST00000496750.5:167 ENST00000474602.5:-262 AF064105:-262 LF385531:-262 MA621108:-262 AF064104:-262 ENST00000375241.6:-275 NM_033331:-275 NM_003671:-275 NR_147239:-275 NM_001351567:-275 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.2 | |cpg_percent=0.2 | ||
|distance=64 | |distance=64 | ||
| − | |distance_to_tss= | + | |distance_to_tss=327 |
|end=96619568 | |end=96619568 | ||
|end_of_center_position=96619516 | |end_of_center_position=96619516 | ||
|entrez_id=8555 | |entrez_id=8555 | ||
|gc_percent=0.875622 | |gc_percent=0.875622 | ||
| − | |gene_alias=CDC14B3 | + | |gene_alias=CDC14B3{{!}}Cdc14B1{{!}}Cdc14B2{{!}}hCDC14B |
|gene_description=cell division cycle 14B | |gene_description=cell division cycle 14B | ||
|gene_id=8555 | |gene_id=8555 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:1719 | |hgnc_mgi_id=HGNC:1719 | ||
|nearest_ensembl=ENSG00000081377 | |nearest_ensembl=ENSG00000081377 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351567 |
|nearest_refseq=NM_003671 | |nearest_refseq=NM_003671 | ||
|nearest_unigene=Hs.40582 | |nearest_unigene=Hs.40582 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=96619463 | |start=96619463 | ||
|start_of_center_position=96619515 | |start_of_center_position=96619515 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000463569.5 | + | |transcript_name=ENST00000463569.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101604.1 | |tss_id=hg_101604.1 | ||
Revision as of 16:44, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 96619515 |
|---|---|
| End of the center position in the TSS region: | 96619516 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000463569.5 |
|---|---|
| Distance: | 64 |
| Num_trans: | 19 |
| All_trans: | ENST00000463569.5:64 BC156666:84 AB590751:84 ENST00000375240.7:86 AF023158:86 EF611343:86 ENST00000412285.6:101 AK225361:101 ENST00000496750.5:167 ENST00000474602.5:-262 AF064105:-262 LF385531:-262 MA621108:-262 AF064104:-262 ENST00000375241.6:-275 NM_033331:-275 NM_003671:-275 NR_147239:-275 NM_001351567:-275 |
TATA-Box annotation
| Distance to TSS: | 327 |
|---|---|
| Nearest PromoterID: | NM_001351567 |
| Entrez ID: | 8555 |
| Nearest Unigene: | Hs.40582 |
| Nearest Refseq: | NM_003671 |
| Nearest Ensembl: | ENSG00000081377 |
| Gene Name: | cell division cycle 14B |
| Gene Alias: | CDC14B3|Cdc14B1|Cdc14B2|hCDC14B |
| Gene Description: | cell division cycle 14B |
| Gene Type: | protein-coding |
| CpG%: | 0.2 |
| GC%: | 0.875622 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
