Difference between revisions of "TSS:Hg 101645.1"
From referenceTSS
| Line 2: | Line 2: | ||
|HSPC219= | |HSPC219= | ||
|NAP1= | |NAP1= | ||
| − | |all_trans= | + | |all_trans=AK000213:0 AK302701:0 BC002863:14 LF206453:26 MA442030:26 AK309270:35 AF151053:46 ENST00000611338.4:48 AY189280:48 ENST00000375119.8:64 NM_001371657:64 NM_001371658:64 NM_016481:64 NM_001330725:64 NM_001371661:64 NM_001371660:64 DQ892983:69 DQ896231:69 KJ898914:71 CU678254:71 ENST00000375117.8:74 ENST00000455506.1:77 ENST00000478126.5:92 ENST00000471580.1:96 ENST00000660312.1:383 NM_001371659:383 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 11: | Line 11: | ||
|entrez_id=51531 | |entrez_id=51531 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=C9orf156 | + | |gene_alias=C9orf156{{!}}HSPC219{{!}}NAP1 |
|gene_description=tRNA methyltransferase O | |gene_description=tRNA methyltransferase O | ||
|gene_id=51531 | |gene_id=51531 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:30967 | |hgnc_mgi_id=HGNC:30967 | ||
|nearest_ensembl=ENSG00000136932 | |nearest_ensembl=ENSG00000136932 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_016481 |
|nearest_refseq=NM_016481 | |nearest_refseq=NM_016481 | ||
|nearest_unigene=Hs.9196 | |nearest_unigene=Hs.9196 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=97922563 | |start=97922563 | ||
|start_of_center_position=97922568 | |start_of_center_position=97922568 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK000213 AK302701 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101645.1 | |tss_id=hg_101645.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B7Z7Z7 | + | |uniprot_id=B7Z7Z7 |
}} | }} | ||
Revision as of 16:45, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 97922568 |
|---|---|
| End of the center position in the TSS region: | 97922569 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK000213 AK302701 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | AK000213:0 AK302701:0 BC002863:14 LF206453:26 MA442030:26 AK309270:35 AF151053:46 ENST00000611338.4:48 AY189280:48 ENST00000375119.8:64 NM_001371657:64 NM_001371658:64 NM_016481:64 NM_001330725:64 NM_001371661:64 NM_001371660:64 DQ892983:69 DQ896231:69 KJ898914:71 CU678254:71 ENST00000375117.8:74 ENST00000455506.1:77 ENST00000478126.5:92 ENST00000471580.1:96 ENST00000660312.1:383 NM_001371659:383 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_016481 |
| Entrez ID: | 51531 |
| Nearest Unigene: | Hs.9196 |
| Nearest Refseq: | NM_016481 |
| Nearest Ensembl: | ENSG00000136932 |
| Gene Name: | tRNA methyltransferase O |
| Gene Alias: | C9orf156|HSPC219|NAP1 |
| Gene Description: | tRNA methyltransferase O |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
