Difference between revisions of "TSS:Hg 101702.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PKDR1= | |PKDR1= | ||
|SAMD6= | |SAMD6= | ||
| − | |all_trans= | + | |all_trans=ENST00000471846.1:-90 ENST00000353234.5:-106 NM_173551:-106 CR749467:208 ENST00000634393.1:425 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
|distance=-90 | |distance=-90 | ||
| − | |distance_to_tss= | + | |distance_to_tss=120 |
|end=98796449 | |end=98796449 | ||
|end_of_center_position=98796435 | |end_of_center_position=98796435 | ||
|entrez_id=203286 | |entrez_id=203286 | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
| − | |gene_alias=ANKRD14 | + | |gene_alias=ANKRD14{{!}}NPHP16{{!}}PKDR1{{!}}SAMD6 |
|gene_description=ankyrin repeat and sterile alpha motif domain containing 6 | |gene_description=ankyrin repeat and sterile alpha motif domain containing 6 | ||
|gene_id=203286 | |gene_id=203286 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_173551 | |nearest_refseq=NM_173551 | ||
|nearest_unigene=Hs.406890 | |nearest_unigene=Hs.406890 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=98796420 | |start=98796420 | ||
|start_of_center_position=98796434 | |start_of_center_position=98796434 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000471846.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101702.1 | |tss_id=hg_101702.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:46, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98796434 |
|---|---|
| End of the center position in the TSS region: | 98796435 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000471846.1 |
|---|---|
| Distance: | -90 |
| Num_trans: | 5 |
| All_trans: | ENST00000471846.1:-90 ENST00000353234.5:-106 NM_173551:-106 CR749467:208 ENST00000634393.1:425 |
TATA-Box annotation
| Distance to TSS: | 120 |
|---|---|
| Nearest PromoterID: | NM_173551 |
| Entrez ID: | 203286 |
| Nearest Unigene: | Hs.406890 |
| Nearest Refseq: | NM_173551 |
| Nearest Ensembl: | ENSG00000165138 |
| Gene Name: | ankyrin repeat and sterile alpha motif domain containing 6 |
| Gene Alias: | ANKRD14|NPHP16|PKDR1|SAMD6 |
| Gene Description: | ankyrin repeat and sterile alpha motif domain containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
