Difference between revisions of "TSS:Hg 101765.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK057524:0 AF085237:0 BC066299:0 AK302547:0 AF145026:0 AF400667:0 JF432717:0 KJ891875:0 | + | |all_trans=ENST00000374806.2:0 NM_147180:0 AK057524:0 AF085237:0 BC066299:0 AK302547:0 AF145026:0 AF400667:0 JF432717:0 KJ891875:0 BC030595:-9 ENST00000636434.1:-29 AK310471:-29 DQ598604:462 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=14 |
|end=101594992 | |end=101594992 | ||
|end_of_center_position=101594955 | |end_of_center_position=101594955 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=PPP3RL | |gene_alias=PPP3RL | ||
| − | |gene_description= | + | |gene_description=protein phosphatase 3 regulatory subunit B, beta |
|gene_id=5535 | |gene_id=5535 | ||
| − | |gene_name= | + | |gene_name=protein phosphatase 3 regulatory subunit B, beta |
|gene_source=HGNC:9318 | |gene_source=HGNC:9318 | ||
|gene_symbol=PPP3R2 | |gene_symbol=PPP3R2 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=101594954 | |start_of_center_position=101594954 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK057524 AF085237 BC066299 AK302547 AF145026 AF400667 JF432717 KJ891875 | + | |transcript_name=ENST00000374806.2 NM_147180 AK057524 AF085237 BC066299 AK302547 AF145026 AF400667 JF432717 KJ891875 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101765.1 | |tss_id=hg_101765.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q96LZ3 |
}} | }} | ||
Revision as of 16:47, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 101594954 |
|---|---|
| End of the center position in the TSS region: | 101594955 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374806.2 NM_147180 AK057524 AF085237 BC066299 AK302547 AF145026 AF400667 JF432717 KJ891875 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000374806.2:0 NM_147180:0 AK057524:0 AF085237:0 BC066299:0 AK302547:0 AF145026:0 AF400667:0 JF432717:0 KJ891875:0 BC030595:-9 ENST00000636434.1:-29 AK310471:-29 DQ598604:462 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_147180 |
| Entrez ID: | 5535 |
| Nearest Unigene: | Hs.151167 |
| Nearest Refseq: | NM_147180 |
| Nearest Ensembl: | ENSG00000188386 |
| Gene Name: | protein phosphatase 3 regulatory subunit B, beta |
| Gene Alias: | PPP3RL |
| Gene Description: | protein phosphatase 3 regulatory subunit B, beta |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
