Difference between revisions of "TSS:Hg 101777.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000411575.5 | + | |all_trans=ENST00000411575.5:2 NR_121578:3 BC035187:6 ENST00000455051.2:258 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_121578 | |nearest_refseq=NR_121578 | ||
|nearest_unigene=Hs.410860 | |nearest_unigene=Hs.410860 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=103325035 | |start=103325035 | ||
|start_of_center_position=103325052 | |start_of_center_position=103325052 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=83(CTTTATATACAG,+,0.00) |
| − | |transcript_name=ENST00000411575.5 | + | |transcript_name=ENST00000411575.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101777.1 | |tss_id=hg_101777.1 | ||
Revision as of 16:48, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 103325052 |
|---|---|
| End of the center position in the TSS region: | 103325053 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000411575.5 |
|---|---|
| Distance: | 2 |
| Num_trans: | 4 |
| All_trans: | ENST00000411575.5:2 NR_121578:3 BC035187:6 ENST00000455051.2:258 |
TATA-Box annotation
| Distance to TSS: | -20 |
|---|---|
| Nearest PromoterID: | NR_121578 |
| Entrez ID: | 101928496 |
| Nearest Unigene: | Hs.410860 |
| Nearest Refseq: | NR_121578 |
| Nearest Ensembl: | ENSG00000225564 |
| Gene Name: | long intergenic non-protein coding RNA 1492 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1492 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 83(CTTTATATACAG,+,0.00) |
