Difference between revisions of "TSS:Hg 101787.1"
From referenceTSS
| Line 2: | Line 2: | ||
|NIPSNAP3= | |NIPSNAP3= | ||
|SNAP1= | |SNAP1= | ||
| + | |all_trans=LF354657:23 MA590234:23 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=23 |
| − | |distance_to_tss= | + | |distance_to_tss=46771 |
|end=104810907 | |end=104810907 | ||
|end_of_center_position=104810900 | |end_of_center_position=104810900 | ||
|entrez_id=55335 | |entrez_id=55335 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=FP944 | + | |gene_alias=FP944{{!}}NIPSNAP3{{!}}SNAP1 |
|gene_description=nipsnap homolog 3B | |gene_description=nipsnap homolog 3B | ||
|gene_name=NIPSNAP3B | |gene_name=NIPSNAP3B | ||
| Line 18: | Line 19: | ||
|nearest_refseq=NM_018376 | |nearest_refseq=NM_018376 | ||
|nearest_unigene=Hs.429294 | |nearest_unigene=Hs.429294 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=104810892 | |start=104810892 | ||
|start_of_center_position=104810899 | |start_of_center_position=104810899 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF354657 MA590234 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101787.1 | |tss_id=hg_101787.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:48, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 104810899 |
|---|---|
| End of the center position in the TSS region: | 104810900 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF354657 MA590234 |
|---|---|
| Distance: | 23 |
| Num_trans: | 2 |
| All_trans: | LF354657:23 MA590234:23 |
TATA-Box annotation
| Distance to TSS: | 46771 |
|---|---|
| Nearest PromoterID: | NR_130760 |
| Entrez ID: | 55335 |
| Nearest Unigene: | Hs.429294 |
| Nearest Refseq: | NM_018376 |
| Nearest Ensembl: | ENSG00000165028 |
| Gene Name: | NIPSNAP3B |
| Gene Alias: | FP944|NIPSNAP3|SNAP1 |
| Gene Description: | nipsnap homolog 3B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
