Difference between revisions of "TSS:Hg 101798.1"
From referenceTSS
| Line 4: | Line 4: | ||
|HDLDT1= | |HDLDT1= | ||
|TGD= | |TGD= | ||
| − | |all_trans=AB037924:2 AB055982:89 AB445477:89 | + | |all_trans=AB037924:2 AB055982:89 AB445477:89 LF354695:-338 MA590272:-338 LF354696:-454 MA590273:-454 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=2 | |distance=2 | ||
| − | |distance_to_tss= | + | |distance_to_tss=24381 |
|end=104903780 | |end=104903780 | ||
|end_of_center_position=104903774 | |end_of_center_position=104903774 | ||
|entrez_id=19 | |entrez_id=19 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=ABC-1 | + | |gene_alias=ABC-1{{!}}ABC1{{!}}CERP{{!}}HDLDT1{{!}}TGD |
|gene_description=ATP binding cassette subfamily A member 1 | |gene_description=ATP binding cassette subfamily A member 1 | ||
|gene_id=19 | |gene_id=19 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_005502 | |nearest_refseq=NM_005502 | ||
|nearest_unigene=Hs.659274 | |nearest_unigene=Hs.659274 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=104903767 | |start=104903767 | ||
Revision as of 16:48, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 104903773 |
|---|---|
| End of the center position in the TSS region: | 104903774 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB037924 |
|---|---|
| Distance: | 2 |
| Num_trans: | 7 |
| All_trans: | AB037924:2 AB055982:89 AB445477:89 LF354695:-338 MA590272:-338 LF354696:-454 MA590273:-454 |
TATA-Box annotation
| Distance to TSS: | 24381 |
|---|---|
| Nearest PromoterID: | NM_005502 |
| Entrez ID: | 19 |
| Nearest Unigene: | Hs.659274 |
| Nearest Refseq: | NM_005502 |
| Nearest Ensembl: | ENSG00000165029 |
| Gene Name: | ATP binding cassette subfamily A member 1 |
| Gene Alias: | ABC-1|ABC1|CERP|HDLDT1|TGD |
| Gene Description: | ATP binding cassette subfamily A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
