Difference between revisions of "TSS:Hg 101841.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GKLF= | |GKLF= | ||
| − | |all_trans=ENST00000497048.5 | + | |all_trans=ENST00000497048.5:-114 AK095134:-114 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=-114 | |distance=-114 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1441 |
|end=107488333 | |end=107488333 | ||
|end_of_center_position=107488328 | |end_of_center_position=107488328 | ||
|entrez_id=9314 | |entrez_id=9314 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=EZF | + | |gene_alias=EZF{{!}}GKLF |
|gene_description=Kruppel like factor 4 | |gene_description=Kruppel like factor 4 | ||
|gene_id=9314 | |gene_id=9314 | ||
| − | |gene_name=Kruppel | + | |gene_name=Kruppel like factor 4 |
|gene_source=HGNC:6348 | |gene_source=HGNC:6348 | ||
|gene_symbol=KLF4 | |gene_symbol=KLF4 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:6348 | |hgnc_mgi_id=HGNC:6348 | ||
|nearest_ensembl=ENSG00000136826 | |nearest_ensembl=ENSG00000136826 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_004235 |
|nearest_refseq=NM_004235 | |nearest_refseq=NM_004235 | ||
|nearest_unigene=Hs.376206 | |nearest_unigene=Hs.376206 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=107488322 | |start=107488322 | ||
|start_of_center_position=107488327 | |start_of_center_position=107488327 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000497048.5 | + | |transcript_name=ENST00000497048.5 AK095134 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101841.1 | |tss_id=hg_101841.1 | ||
Revision as of 16:49, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 107488327 |
|---|---|
| End of the center position in the TSS region: | 107488328 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000497048.5 AK095134 |
|---|---|
| Distance: | -114 |
| Num_trans: | 2 |
| All_trans: | ENST00000497048.5:-114 AK095134:-114 |
TATA-Box annotation
| Distance to TSS: | 1441 |
|---|---|
| Nearest PromoterID: | NM_004235 |
| Entrez ID: | 9314 |
| Nearest Unigene: | Hs.376206 |
| Nearest Refseq: | NM_004235 |
| Nearest Ensembl: | ENSG00000136826 |
| Gene Name: | Kruppel like factor 4 |
| Gene Alias: | EZF|GKLF |
| Gene Description: | Kruppel like factor 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
