Difference between revisions of "TSS:Hg 101847.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GKLF= | |GKLF= | ||
| − | |all_trans= | + | |all_trans=ENST00000374672.5:25 NM_001314052:25 NM_004235:25 ENST00000610832.1:28 U70663:148 AF022184:238 AF105036:320 ENST00000493306.1:357 HF546201:393 HF546202:393 HF546213:393 LF211949:-426 MA447526:-426 AK313489:485 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=25 |
| − | |distance_to_tss=- | + | |distance_to_tss=-27 |
|end=107489798 | |end=107489798 | ||
|end_of_center_position=107489796 | |end_of_center_position=107489796 | ||
|entrez_id=9314 | |entrez_id=9314 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=EZF | + | |gene_alias=EZF{{!}}GKLF |
|gene_description=Kruppel like factor 4 | |gene_description=Kruppel like factor 4 | ||
|gene_id=9314 | |gene_id=9314 | ||
| − | |gene_name=Kruppel | + | |gene_name=Kruppel like factor 4 |
|gene_source=HGNC:6348 | |gene_source=HGNC:6348 | ||
|gene_symbol=KLF4 | |gene_symbol=KLF4 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:6348 | |hgnc_mgi_id=HGNC:6348 | ||
|nearest_ensembl=ENSG00000136826 | |nearest_ensembl=ENSG00000136826 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001314052 |
|nearest_refseq=NM_004235 | |nearest_refseq=NM_004235 | ||
|nearest_unigene=Hs.376206 | |nearest_unigene=Hs.376206 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=107489793 | |start=107489793 | ||
|start_of_center_position=107489795 | |start_of_center_position=107489795 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000374672.5 NM_001314052 NM_004235 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101847.1 | |tss_id=hg_101847.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=O43474 |
}} | }} | ||
Revision as of 16:49, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 107489795 |
|---|---|
| End of the center position in the TSS region: | 107489796 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374672.5 NM_001314052 NM_004235 |
|---|---|
| Distance: | 25 |
| Num_trans: | 14 |
| All_trans: | ENST00000374672.5:25 NM_001314052:25 NM_004235:25 ENST00000610832.1:28 U70663:148 AF022184:238 AF105036:320 ENST00000493306.1:357 HF546201:393 HF546202:393 HF546213:393 LF211949:-426 MA447526:-426 AK313489:485 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001314052 |
| Entrez ID: | 9314 |
| Nearest Unigene: | Hs.376206 |
| Nearest Refseq: | NM_004235 |
| Nearest Ensembl: | ENSG00000136826 |
| Gene Name: | Kruppel like factor 4 |
| Gene Alias: | EZF|GKLF |
| Gene Description: | Kruppel like factor 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
