Difference between revisions of "TSS:Hg 101879.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CG-2= | |CG-2= | ||
|CG2= | |CG2= | ||
| − | |all_trans=ENST00000374586. | + | |all_trans=ENST00000374586.8:0 NM_032012:0 AF153415:0 AK299952:0 BC142984:0 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=109119975 | |end=109119975 | ||
|end_of_center_position=109119946 | |end_of_center_position=109119946 | ||
|entrez_id=23731 | |entrez_id=23731 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=C9orf5 | + | |gene_alias=C9orf5{{!}}CG-2{{!}}CG2 |
|gene_description=transmembrane protein 245 | |gene_description=transmembrane protein 245 | ||
|gene_id=23731 | |gene_id=23731 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_032012 | |nearest_refseq=NM_032012 | ||
|nearest_unigene=Hs.308074 | |nearest_unigene=Hs.308074 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=109119915 | |start=109119915 | ||
|start_of_center_position=109119945 | |start_of_center_position=109119945 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000374586. | + | |transcript_name=ENST00000374586.8 NM_032012 AF153415 AK299952 BC142984 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101879.1 | |tss_id=hg_101879.1 | ||
Revision as of 16:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109119945 |
|---|---|
| End of the center position in the TSS region: | 109119946 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374586.8 NM_032012 AF153415 AK299952 BC142984 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000374586.8:0 NM_032012:0 AF153415:0 AK299952:0 BC142984:0 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_032012 |
| Entrez ID: | 23731 |
| Nearest Unigene: | Hs.308074 |
| Nearest Refseq: | NM_032012 |
| Nearest Ensembl: | ENSG00000106771 |
| Gene Name: | transmembrane protein 245 |
| Gene Alias: | C9orf5|CG-2|CG2 |
| Gene Description: | transmembrane protein 245 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
