Difference between revisions of "TSS:Hg 101881.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CG6= | |CG6= | ||
|EIEE37= | |EIEE37= | ||
| − | |all_trans=ENST00000561981. | + | |all_trans=ENST00000561981.5:0 NM_014334:0 BC156447:-27 AF155065:-27 ENST00000644747.1:159 ENST00000642299.1:229 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=78 | |distance_to_tss=78 | ||
|end=109167264 | |end=109167264 | ||
| Line 12: | Line 12: | ||
|entrez_id=23732 | |entrez_id=23732 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=C9orf4 | + | |gene_alias=C9orf4{{!}}CG-6{{!}}CG6{{!}}EIEE37 |
|gene_description=ferric chelate reductase 1 like | |gene_description=ferric chelate reductase 1 like | ||
|gene_id=23732 | |gene_id=23732 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_014334 | |nearest_refseq=NM_014334 | ||
|nearest_unigene=Hs.347537 | |nearest_unigene=Hs.347537 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=109167161 | |start=109167161 | ||
|start_of_center_position=109167212 | |start_of_center_position=109167212 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000561981. | + | |transcript_name=ENST00000561981.5 NM_014334 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101881.1 | |tss_id=hg_101881.1 | ||
Revision as of 16:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109167212 |
|---|---|
| End of the center position in the TSS region: | 109167213 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000561981.5 NM_014334 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000561981.5:0 NM_014334:0 BC156447:-27 AF155065:-27 ENST00000644747.1:159 ENST00000642299.1:229 |
TATA-Box annotation
| Distance to TSS: | 78 |
|---|---|
| Nearest PromoterID: | NM_014334 |
| Entrez ID: | 23732 |
| Nearest Unigene: | Hs.347537 |
| Nearest Refseq: | NM_014334 |
| Nearest Ensembl: | ENSG00000260230 |
| Gene Name: | ferric chelate reductase 1 like |
| Gene Alias: | C9orf4|CG-6|CG6|EIEE37 |
| Gene Description: | ferric chelate reductase 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
