Difference between revisions of "TSS:Hg 102008.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK122712:-141 ENST00000602447.5 | + | |all_trans=AK122712:-141 ENST00000602447.5:163 ENST00000602978.1:-171 NM_001364930:280 NM_001364931:280 AK308313:280 LF354975:-468 MA590552:-468 ENST00000338205.9:-471 NM_001364929:-497 NM_001363756:-497 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
|distance=-141 | |distance=-141 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-302 |
|end=111483886 | |end=111483886 | ||
|end_of_center_position=111483864 | |end_of_center_position=111483864 | ||
|entrez_id=23392 | |entrez_id=23392 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=ECM29 | + | |gene_alias=ECM29{{!}}KIAA0368 |
| − | |gene_description= | + | |gene_description=Ecm29 proteasome adaptor and scaffold |
|gene_id=23392 | |gene_id=23392 | ||
| − | |gene_name= | + | |gene_name=Ecm29 proteasome adaptor and scaffold |
|gene_source=HGNC:29020 | |gene_source=HGNC:29020 | ||
| − | |gene_symbol= | + | |gene_symbol=ECPAS |
|gene_synonyms=ECM29 FLJ22036 | |gene_synonyms=ECM29 FLJ22036 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:29020 | |hgnc_mgi_id=HGNC:29020 | ||
|nearest_ensembl=ENSG00000136813 | |nearest_ensembl=ENSG00000136813 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001364931 |
|nearest_refseq=NM_001080398 | |nearest_refseq=NM_001080398 | ||
|nearest_unigene=Hs.368255 | |nearest_unigene=Hs.368255 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=111483841 | |start=111483841 | ||
Revision as of 16:53, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111483863 |
|---|---|
| End of the center position in the TSS region: | 111483864 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK122712 |
|---|---|
| Distance: | -141 |
| Num_trans: | 11 |
| All_trans: | AK122712:-141 ENST00000602447.5:163 ENST00000602978.1:-171 NM_001364930:280 NM_001364931:280 AK308313:280 LF354975:-468 MA590552:-468 ENST00000338205.9:-471 NM_001364929:-497 NM_001363756:-497 |
TATA-Box annotation
| Distance to TSS: | -302 |
|---|---|
| Nearest PromoterID: | NM_001364931 |
| Entrez ID: | 23392 |
| Nearest Unigene: | Hs.368255 |
| Nearest Refseq: | NM_001080398 |
| Nearest Ensembl: | ENSG00000136813 |
| Gene Name: | Ecm29 proteasome adaptor and scaffold |
| Gene Alias: | ECM29|KIAA0368 |
| Gene Description: | Ecm29 proteasome adaptor and scaffold |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
