Difference between revisions of "TSS:Hg 102101.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|C9orf158= | |C9orf158= | ||
| − | |all_trans=AK315401:0 ENST00000485934.1:2 | + | |all_trans=AK315401:0 ENST00000485934.1:2 NM_001371923:-26 NM_001304511:-26 NM_001304509:-26 NM_001304510:-26 ENST00000374180.3:-39 NM_031219:327 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=43 |
|end=113376960 | |end=113376960 | ||
|end_of_center_position=113376944 | |end_of_center_position=113376944 | ||
|entrez_id=81932 | |entrez_id=81932 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=2810435D12Rik | + | |gene_alias=2810435D12Rik{{!}}C9orf158 |
|gene_description=haloacid dehalogenase like hydrolase domain containing 3 | |gene_description=haloacid dehalogenase like hydrolase domain containing 3 | ||
|gene_id=81932 | |gene_id=81932 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:28171 | |hgnc_mgi_id=HGNC:28171 | ||
|nearest_ensembl=ENSG00000119431 | |nearest_ensembl=ENSG00000119431 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001304509 |
|nearest_refseq=NM_031219 | |nearest_refseq=NM_031219 | ||
|nearest_unigene=Hs.7739 | |nearest_unigene=Hs.7739 | ||
Revision as of 16:55, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113376943 |
|---|---|
| End of the center position in the TSS region: | 113376944 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK315401 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | AK315401:0 ENST00000485934.1:2 NM_001371923:-26 NM_001304511:-26 NM_001304509:-26 NM_001304510:-26 ENST00000374180.3:-39 NM_031219:327 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NM_001304509 |
| Entrez ID: | 81932 |
| Nearest Unigene: | Hs.7739 |
| Nearest Refseq: | NM_031219 |
| Nearest Ensembl: | ENSG00000119431 |
| Gene Name: | haloacid dehalogenase like hydrolase domain containing 3 |
| Gene Alias: | 2810435D12Rik|C9orf158 |
| Gene Description: | haloacid dehalogenase like hydrolase domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
