Difference between revisions of "TSS:Hg 98091.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CHRAC17= | |CHRAC17= | ||
|YBL1= | |YBL1= | ||
| − | |all_trans=ENST00000288462.4:0 | + | |all_trans=ENST00000288462.4:0 ENST00000374165.6:0 NM_152786:0 NM_001278630:0 NM_001278629:0 BC026884:0 AK301872:-12 BC033037:-35 AK313867:-66 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-10 |
|end=113410753 | |end=113410753 | ||
|end_of_center_position=113410737 | |end_of_center_position=113410737 | ||
| − | |entrez_id= | + | |entrez_id=257169 |
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=chromosome 9 open reading frame 43 |
|gene_id=257169 | |gene_id=257169 | ||
|gene_name=chromosome 9 open reading frame 43 | |gene_name=chromosome 9 open reading frame 43 | ||
| Line 20: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:23570 | |hgnc_mgi_id=HGNC:23570 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000157653 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001278630 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_152786 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.632691 |
| − | |num_trans= | + | |num_trans=9 |
|p17= | |p17= | ||
|species=human | |species=human | ||
| Line 30: | Line 30: | ||
|start_of_center_position=113410736 | |start_of_center_position=113410736 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000288462.4 | + | |transcript_name=ENST00000288462.4 ENST00000374165.6 NM_152786 NM_001278630 NM_001278629 BC026884 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_98091.1 | |tss_id=hg_98091.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R879 Q8TAL5 | + | |uniprot_id=A0A024R879 B4DX97 Q8TAL5 |
}} | }} | ||
Revision as of 21:32, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113410736 |
|---|---|
| End of the center position in the TSS region: | 113410737 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000288462.4 ENST00000374165.6 NM_152786 NM_001278630 NM_001278629 BC026884 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000288462.4:0 ENST00000374165.6:0 NM_152786:0 NM_001278630:0 NM_001278629:0 BC026884:0 AK301872:-12 BC033037:-35 AK313867:-66 |
TATA-Box annotation
| Distance to TSS: | -10 |
|---|---|
| Nearest PromoterID: | NM_001278630 |
| Entrez ID: | 257169 |
| Nearest Unigene: | Hs.632691 |
| Nearest Refseq: | NM_152786 |
| Nearest Ensembl: | ENSG00000157653 |
| Gene Name: | chromosome 9 open reading frame 43 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 43 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
