Difference between revisions of "TSS:Hg 102142.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AGP-B'= | |AGP-B'= | ||
|AGP2= | |AGP2= | ||
| − | |all_trans=ENST00000374079.8:-21 ENST00000491133 | + | |all_trans=ENST00000374079.8:-21 ENST00000491133.1:-21 BC042202:-21 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 11: | Line 11: | ||
|entrez_id=5005 | |entrez_id=5005 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=AGP-B | + | |gene_alias=AGP-B{{!}}AGP-B'{{!}}AGP2 |
|gene_description=orosomucoid 2 | |gene_description=orosomucoid 2 | ||
|gene_id=80709 | |gene_id=80709 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_000608 | |nearest_refseq=NM_000608 | ||
|nearest_unigene=Hs.719954 | |nearest_unigene=Hs.719954 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=114348966 | |start=114348966 | ||
|start_of_center_position=114348972 | |start_of_center_position=114348972 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000374079.8 ENST00000491133 | + | |transcript_name=ENST00000374079.8 ENST00000491133.1 BC042202 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102142.1 | |tss_id=hg_102142.1 | ||
Revision as of 16:56, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114348972 |
|---|---|
| End of the center position in the TSS region: | 114348973 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374079.8 ENST00000491133.1 BC042202 |
|---|---|
| Distance: | -21 |
| Num_trans: | 3 |
| All_trans: | ENST00000374079.8:-21 ENST00000491133.1:-21 BC042202:-21 |
TATA-Box annotation
| Distance to TSS: | 19183 |
|---|---|
| Nearest PromoterID: | NM_000608 |
| Entrez ID: | 5005 |
| Nearest Unigene: | Hs.719954 |
| Nearest Refseq: | NM_000608 |
| Nearest Ensembl: | ENSG00000228278 |
| Gene Name: | AT-hook transcription factor |
| Gene Alias: | AGP-B|AGP-B'|AGP2 |
| Gene Description: | orosomucoid 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
