Difference between revisions of "TSS:Hg 102186.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CD30LG= | |CD30LG= | ||
|TNLG3A= | |TNLG3A= | ||
| − | |all_trans=KJ890862:-13 AB590754:-13 BC111939:-87 BC093630:-87 | + | |all_trans=KJ890862:-13 AB590754:-13 BC111939:-87 BC093630:-87 L09753:-127 ENST00000223795.3:-301 NM_001244:-301 ENST00000618336.4:-305 NM_001252290:-305 AK313619:-305 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 12: | Line 12: | ||
|entrez_id=944 | |entrez_id=944 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=CD153 | + | |gene_alias=CD153{{!}}CD30L{{!}}CD30LG{{!}}TNLG3A |
| − | |gene_description= | + | |gene_description=TNF superfamily member 8 |
|gene_id=944 | |gene_id=944 | ||
| − | |gene_name= | + | |gene_name=TNF superfamily member 8 |
|gene_source=HGNC:11938 | |gene_source=HGNC:11938 | ||
|gene_symbol=TNFSF8 | |gene_symbol=TNFSF8 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_001244 | |nearest_refseq=NM_001244 | ||
|nearest_unigene=Hs.494901 | |nearest_unigene=Hs.494901 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=114930274 | |start=114930274 | ||
|start_of_center_position=114930282 | |start_of_center_position=114930282 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(GACTATATAAAG,-,0.00) |
|transcript_name=KJ890862 AB590754 | |transcript_name=KJ890862 AB590754 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 16:57, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114930282 |
|---|---|
| End of the center position in the TSS region: | 114930283 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | KJ890862 AB590754 |
|---|---|
| Distance: | -13 |
| Num_trans: | 10 |
| All_trans: | KJ890862:-13 AB590754:-13 BC111939:-87 BC093630:-87 L09753:-127 ENST00000223795.3:-301 NM_001244:-301 ENST00000618336.4:-305 NM_001252290:-305 AK313619:-305 |
TATA-Box annotation
| Distance to TSS: | 313 |
|---|---|
| Nearest PromoterID: | NM_001244 |
| Entrez ID: | 944 |
| Nearest Unigene: | Hs.494901 |
| Nearest Refseq: | NM_001244 |
| Nearest Ensembl: | ENSG00000106952 |
| Gene Name: | TNF superfamily member 8 |
| Gene Alias: | CD153|CD30L|CD30LG|TNLG3A |
| Gene Description: | TNF superfamily member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GACTATATAAAG,-,0.00) |
