Difference between revisions of "TSS:Hg 102187.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CD30LG= | |CD30LG= | ||
|TNLG3A= | |TNLG3A= | ||
| − | |all_trans=BC111939:-16 BC093630:-16 KJ890862:55 AB590754:55 | + | |all_trans=BC111939:-16 BC093630:-16 KJ890862:55 AB590754:55 L09753:-56 ENST00000223795.3:-230 NM_001244:-230 ENST00000618336.4:-234 NM_001252290:-234 AK313619:-234 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 12: | Line 12: | ||
|entrez_id=944 | |entrez_id=944 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=CD153 | + | |gene_alias=CD153{{!}}CD30L{{!}}CD30LG{{!}}TNLG3A |
| − | |gene_description= | + | |gene_description=TNF superfamily member 8 |
|gene_id=944 | |gene_id=944 | ||
| − | |gene_name= | + | |gene_name=TNF superfamily member 8 |
|gene_source=HGNC:11938 | |gene_source=HGNC:11938 | ||
|gene_symbol=TNFSF8 | |gene_symbol=TNFSF8 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_001244 | |nearest_refseq=NM_001244 | ||
|nearest_unigene=Hs.494901 | |nearest_unigene=Hs.494901 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=114930357 | |start=114930357 | ||
|start_of_center_position=114930359 | |start_of_center_position=114930359 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=43(GACTATATAAAG,-,0.00) |
|transcript_name=BC111939 BC093630 | |transcript_name=BC111939 BC093630 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 16:57, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114930359 |
|---|---|
| End of the center position in the TSS region: | 114930360 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC111939 BC093630 |
|---|---|
| Distance: | -16 |
| Num_trans: | 10 |
| All_trans: | BC111939:-16 BC093630:-16 KJ890862:55 AB590754:55 L09753:-56 ENST00000223795.3:-230 NM_001244:-230 ENST00000618336.4:-234 NM_001252290:-234 AK313619:-234 |
TATA-Box annotation
| Distance to TSS: | 236 |
|---|---|
| Nearest PromoterID: | NM_001244 |
| Entrez ID: | 944 |
| Nearest Unigene: | Hs.494901 |
| Nearest Refseq: | NM_001244 |
| Nearest Ensembl: | ENSG00000106952 |
| Gene Name: | TNF superfamily member 8 |
| Gene Alias: | CD153|CD30L|CD30LG|TNLG3A |
| Gene Description: | TNF superfamily member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 43(GACTATATAAAG,-,0.00) |
