Difference between revisions of "TSS:Hg 102276.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|MIRN147= | |MIRN147= | ||
| − | |all_trans=ENST00000474262.5 | + | |all_trans=ENST00000474262.5:-121 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 10: | Line 10: | ||
|entrez_id=406939 | |entrez_id=406939 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=MIR147 | + | |gene_alias=MIR147{{!}}MIRN147{{!}}hsa-mir-147a |
|gene_description=microRNA 147a | |gene_description=microRNA 147a | ||
|gene_id=55755 | |gene_id=55755 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NR_029604 | |nearest_refseq=NR_029604 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=120400870 | |start=120400870 | ||
|start_of_center_position=120400884 | |start_of_center_position=120400884 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-45(CTTTTTCAAGAC,+,0.00) |
| − | |transcript_name=ENST00000474262.5 | + | |transcript_name=ENST00000474262.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102276.1 | |tss_id=hg_102276.1 | ||
Revision as of 16:59, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120400884 |
|---|---|
| End of the center position in the TSS region: | 120400885 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000474262.5 |
|---|---|
| Distance: | -121 |
| Num_trans: | 1 |
| All_trans: | ENST00000474262.5:-121 |
TATA-Box annotation
| Distance to TSS: | -155834 |
|---|---|
| Nearest PromoterID: | NR_029604 |
| Entrez ID: | 406939 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029604 |
| Nearest Ensembl: | ENSG00000207814 |
| Gene Name: | CDK5 regulatory subunit associated protein 2 |
| Gene Alias: | MIR147|MIRN147|hsa-mir-147a |
| Gene Description: | microRNA 147a |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -45(CTTTTTCAAGAC,+,0.00) |
