Difference between revisions of "TSS:Mm 88060.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000099661.2:-19 AK133396:-19 | + | |all_trans=ENSMUST00000099661.2:-19 AK133396:-19 LF198051:-20 MA433628:-20 LF222991:194 MA458568:194 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-19 | |distance=-19 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-109 |
|end=67572076 | |end=67572076 | ||
|end_of_center_position=67572069 | |end_of_center_position=67572069 | ||
| − | |entrez_id= | + | |entrez_id=105245193 |
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=RIKEN cDNA 4930563J15 gene |
|gene_id=100038508 | |gene_id=100038508 | ||
|gene_name=predicted gene 10797 | |gene_name=predicted gene 10797 | ||
| Line 16: | Line 16: | ||
|gene_symbol=Gm10797 | |gene_symbol=Gm10797 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=MGI:3642860 | |hgnc_mgi_id=MGI:3642860 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_155444 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_155444 |
| − | |nearest_unigene=Mm. | + | |nearest_unigene=Mm.72938 |
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=67572060 | |start=67572060 | ||
Revision as of 23:33, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 67572068 |
|---|---|
| End of the center position in the TSS region: | 67572069 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000099661.2 AK133396 |
|---|---|
| Distance: | -19 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000099661.2:-19 AK133396:-19 LF198051:-20 MA433628:-20 LF222991:194 MA458568:194 |
TATA-Box annotation
| Distance to TSS: | -109 |
|---|---|
| Nearest PromoterID: | NR_155444 |
| Entrez ID: | 105245193 |
| Nearest Unigene: | Mm.72938 |
| Nearest Refseq: | NR_155444 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene 10797 |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 4930563J15 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
