Difference between revisions of "TSS:Hg 102407.1"
From referenceTSS
| Line 2: | Line 2: | ||
|GL012= | |GL012= | ||
|NCRNA00287= | |NCRNA00287= | ||
| − | |all_trans=ENST00000447404.6 | + | |all_trans=ENST00000447404.6:-60 AF333337:76 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 11: | Line 11: | ||
|entrez_id=81571 | |entrez_id=81571 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias=C9orf45 | + | |gene_alias=C9orf45{{!}}GL012{{!}}NCRNA00287 |
|gene_description=MIR600 host gene | |gene_description=MIR600 host gene | ||
|gene_id=55342 | |gene_id=55342 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_030814 | |nearest_refseq=NM_030814 | ||
|nearest_unigene=Hs.708072 | |nearest_unigene=Hs.708072 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=123184233 | |start=123184233 | ||
|start_of_center_position=123184241 | |start_of_center_position=123184241 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000447404.6 | + | |transcript_name=ENST00000447404.6 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102407.1 | |tss_id=hg_102407.1 | ||
Revision as of 17:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 123184241 |
|---|---|
| End of the center position in the TSS region: | 123184242 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000447404.6 |
|---|---|
| Distance: | -60 |
| Num_trans: | 2 |
| All_trans: | ENST00000447404.6:-60 AF333337:76 |
TATA-Box annotation
| Distance to TSS: | -68765 |
|---|---|
| Nearest PromoterID: | NR_026677 |
| Entrez ID: | 81571 |
| Nearest Unigene: | Hs.708072 |
| Nearest Refseq: | NM_030814 |
| Nearest Ensembl: | ENSG00000236901 |
| Gene Name: | spermatid perinuclear RNA binding protein |
| Gene Alias: | C9orf45|GL012|NCRNA00287 |
| Gene Description: | MIR600 host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
