Difference between revisions of "TSS:Hg 102464.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NET40= | |NET40= | ||
| − | |all_trans= | + | |all_trans=ENST00000336505.11:11 NM_001144877:11 NM_173690:11 AK093983:21 ENST00000468569.1:33 ENST00000373549.8:43 AK098024:43 ENST00000477186.5:52 BC104030:52 BC104031:52 BC104032:52 AB590983:102 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=11 |
| − | |distance_to_tss= | + | |distance_to_tss=-20 |
|end=125143557 | |end=125143557 | ||
|end_of_center_position=125143548 | |end_of_center_position=125143548 | ||
|entrez_id=286205 | |entrez_id=286205 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=C9orf126 | + | |gene_alias=C9orf126{{!}}NET40 |
|gene_description=suppressor of cancer cell invasion | |gene_description=suppressor of cancer cell invasion | ||
|gene_id=286205 | |gene_id=286205 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_173690 | |nearest_refseq=NM_173690 | ||
|nearest_unigene=Hs.59504 | |nearest_unigene=Hs.59504 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=125143538 | |start=125143538 | ||
|start_of_center_position=125143547 | |start_of_center_position=125143547 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_173690 | + | |transcript_name=ENST00000336505.11 NM_001144877 NM_173690 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102464.1 | |tss_id=hg_102464.1 | ||
Revision as of 17:04, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 125143547 |
|---|---|
| End of the center position in the TSS region: | 125143548 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000336505.11 NM_001144877 NM_173690 |
|---|---|
| Distance: | 11 |
| Num_trans: | 12 |
| All_trans: | ENST00000336505.11:11 NM_001144877:11 NM_173690:11 AK093983:21 ENST00000468569.1:33 ENST00000373549.8:43 AK098024:43 ENST00000477186.5:52 BC104030:52 BC104031:52 BC104032:52 AB590983:102 |
TATA-Box annotation
| Distance to TSS: | -20 |
|---|---|
| Nearest PromoterID: | NM_173690 |
| Entrez ID: | 286205 |
| Nearest Unigene: | Hs.59504 |
| Nearest Refseq: | NM_173690 |
| Nearest Ensembl: | ENSG00000173611 |
| Gene Name: | suppressor of cancer cell invasion |
| Gene Alias: | C9orf126|NET40 |
| Gene Description: | suppressor of cancer cell invasion |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
