Difference between revisions of "TSS:Hg 102469.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PP6C= | |PP6C= | ||
| − | |all_trans=X92972:0 AK295752:-11 AF035158:20 KJ891876:20 BT019708:20 AB385530:20 KU178271:20 KU178272:20 AK312332:-23 ENST00000456642 | + | |all_trans=X92972:0 AK295752:-11 AF035158:20 KJ891876:20 BT019708:20 AB385530:20 KU178271:20 KU178272:20 AK312332:-23 ENST00000456642.1:-35 BC006990:-38 AK316527:-44 ENST00000373547.9:-55 NM_002721:-55 AK299087:-55 AK295190:-55 ENST00000415905.5:-191 ENST00000451402.5:-191 NM_001123369:-191 NM_001123355:-191 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=60 |
|end=125189748 | |end=125189748 | ||
|end_of_center_position=125189743 | |end_of_center_position=125189743 | ||
|entrez_id=5537 | |entrez_id=5537 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=PP6 | + | |gene_alias=PP6{{!}}PP6C |
|gene_description=protein phosphatase 6 catalytic subunit | |gene_description=protein phosphatase 6 catalytic subunit | ||
|gene_id=5537 | |gene_id=5537 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_002721 | |nearest_refseq=NM_002721 | ||
|nearest_unigene=Hs.744091 | |nearest_unigene=Hs.744091 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=125189737 | |start=125189737 | ||
Revision as of 17:04, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125189742 |
|---|---|
| End of the center position in the TSS region: | 125189743 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | X92972 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | X92972:0 AK295752:-11 AF035158:20 KJ891876:20 BT019708:20 AB385530:20 KU178271:20 KU178272:20 AK312332:-23 ENST00000456642.1:-35 BC006990:-38 AK316527:-44 ENST00000373547.9:-55 NM_002721:-55 AK299087:-55 AK295190:-55 ENST00000415905.5:-191 ENST00000451402.5:-191 NM_001123369:-191 NM_001123355:-191 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_002721 |
| Entrez ID: | 5537 |
| Nearest Unigene: | Hs.744091 |
| Nearest Refseq: | NM_002721 |
| Nearest Ensembl: | ENSG00000119414 |
| Gene Name: | protein phosphatase 6 catalytic subunit |
| Gene Alias: | PP6|PP6C |
| Gene Description: | protein phosphatase 6 catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
