Difference between revisions of "TSS:Hg 10657.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=27279 |entrez_id=54896 |gc_percent=0.487562 |gene_alias=- |gene_description=PQ loop repeat containing 2 |gene_name=PQLC2 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=KJ905706:0 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=0 | ||
|distance_to_tss=27279 | |distance_to_tss=27279 | ||
| + | |end=19339563 | ||
|entrez_id=54896 | |entrez_id=54896 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_017765 | |nearest_refseq=NM_017765 | ||
|nearest_unigene=Hs.647620 | |nearest_unigene=Hs.647620 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=19339487 | ||
| + | |strand=- | ||
| + | |transcript_name=KJ905706 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10657.1 | |tss_id=hg_10657.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 22:24, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ905706 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | KJ905706:0 |
TATA-Box annotation
| Distance to TSS: | 27279 |
|---|---|
| Nearest PromoterID: | NM_001040125 |
| Entrez ID: | 54896 |
| Nearest Unigene: | Hs.647620 |
| Nearest Refseq: | NM_017765 |
| Nearest Ensembl: | ENSG00000040487 |
| Gene Name: | PQLC2 |
| Gene Alias: | - |
| Gene Description: | PQ loop repeat containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
