Difference between revisions of "TSS:Hg 219918.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|DYT1= | |DYT1= | ||
| − | |all_trans=ENST00000473084 | + | |all_trans=ENST00000473084.1:-6 BC014484:-6 AK314505:-7 KJ896739:10 KR709744:10 KR709745:10 KJ901397:10 DQ892657:11 DQ895897:11 AB590352:12 BT006931:13 AK075343:-14 BC000674:-25 AF007871:-29 AK056062:-36 ENST00000351698.5:-38 NM_000113:-38 ENST00000651202.1:-146 AK294677:-152 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=-6 | |distance=-6 | ||
| − | |distance_to_tss= | + | |distance_to_tss=38 |
|end=129824098 | |end=129824098 | ||
|end_of_center_position=129824098 | |end_of_center_position=129824098 | ||
|entrez_id=1861 | |entrez_id=1861 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=DQ2 | + | |gene_alias=DQ2{{!}}DYT1 |
|gene_description=torsin family 1 member A | |gene_description=torsin family 1 member A | ||
|gene_id=1861 | |gene_id=1861 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_000113 | |nearest_refseq=NM_000113 | ||
|nearest_unigene=Hs.534312 | |nearest_unigene=Hs.534312 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=129824097 | |start=129824097 | ||
|start_of_center_position=129824097 | |start_of_center_position=129824097 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000473084 | + | |transcript_name=ENST00000473084.1 BC014484 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_219918.1 | |tss_id=hg_219918.1 | ||
Revision as of 08:19, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 129824097 |
|---|---|
| End of the center position in the TSS region: | 129824098 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000473084.1 BC014484 |
|---|---|
| Distance: | -6 |
| Num_trans: | 19 |
| All_trans: | ENST00000473084.1:-6 BC014484:-6 AK314505:-7 KJ896739:10 KR709744:10 KR709745:10 KJ901397:10 DQ892657:11 DQ895897:11 AB590352:12 BT006931:13 AK075343:-14 BC000674:-25 AF007871:-29 AK056062:-36 ENST00000351698.5:-38 NM_000113:-38 ENST00000651202.1:-146 AK294677:-152 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NM_000113 |
| Entrez ID: | 1861 |
| Nearest Unigene: | Hs.534312 |
| Nearest Refseq: | NM_000113 |
| Nearest Ensembl: | ENSG00000136827 |
| Gene Name: | torsin family 1 member A |
| Gene Alias: | DQ2|DYT1 |
| Gene Description: | torsin family 1 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
