Difference between revisions of "TSS:Hg 106622.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-2967 |entrez_id=57715 |gc_percent=0.781095 |gene_alias=- |gene_description=semaphorin 4G |gene_name=SEMA4G |gene_type=protein-c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK297431:-24 ENST00000518244.1:-27 uc057vla.1:-27 ENST00000518124.5:-30 uc057vkz.1:-30 ENST00000521006.5:-34 uc001krv.4:-34 BC051030:-34 ENST00000519649.5:-39 uc057vky.1:-39 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=-24 | ||
|distance_to_tss=-2967 | |distance_to_tss=-2967 | ||
| + | |end=100969568 | ||
|entrez_id=57715 | |entrez_id=57715 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=semaphorin 4G | |gene_description=semaphorin 4G | ||
| − | |gene_name=SEMA4G | + | |gene_id=57715 |
| + | |gene_name=semaphorin 4G | ||
| + | |gene_source=HGNC:10735 | ||
| + | |gene_symbol=SEMA4G | ||
| + | |gene_synonyms=FLJ20590 KIAA1619 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10735 | ||
|nearest_ensembl=ENSG00000095539 | |nearest_ensembl=ENSG00000095539 | ||
|nearest_promoter_id=NM_017893 | |nearest_promoter_id=NM_017893 | ||
|nearest_refseq=NM_017893 | |nearest_refseq=NM_017893 | ||
|nearest_unigene=Hs.591923 | |nearest_unigene=Hs.591923 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=100969556 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK297431 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106622.1 | |tss_id=hg_106622.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DME7 | ||
}} | }} | ||
Revision as of 22:26, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK297431 |
|---|---|
| Distance: | -24 |
| Num_trans: | 10 |
| All_trans: | AK297431:-24 ENST00000518244.1:-27 uc057vla.1:-27 ENST00000518124.5:-30 uc057vkz.1:-30 ENST00000521006.5:-34 uc001krv.4:-34 BC051030:-34 ENST00000519649.5:-39 uc057vky.1:-39 |
TATA-Box annotation
| Distance to TSS: | -2967 |
|---|---|
| Nearest PromoterID: | NM_017893 |
| Entrez ID: | 57715 |
| Nearest Unigene: | Hs.591923 |
| Nearest Refseq: | NM_017893 |
| Nearest Ensembl: | ENSG00000095539 |
| Gene Name: | semaphorin 4G |
| Gene Alias: | - |
| Gene Description: | semaphorin 4G |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
