Difference between revisions of "TSS:Hg 103036.1"
From referenceTSS
| Line 4: | Line 4: | ||
|SARD= | |SARD= | ||
|SDH= | |SDH= | ||
| − | |all_trans=ENST00000298628.6:0 NM_007101 | + | |all_trans=ENST00000298628.6:0 NM_007101:0 AK298348:0 AK316494:0 AF095737:15 ENST00000371872.8:19 AF095735:19 AK223402:97 BC136363:166 BC136364:166 BC144035:166 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 13: | Line 13: | ||
|entrez_id=1757 | |entrez_id=1757 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=BPR-2 | + | |gene_alias=BPR-2{{!}}DMGDHL1{{!}}SAR{{!}}SARD{{!}}SDH |
|gene_description=sarcosine dehydrogenase | |gene_description=sarcosine dehydrogenase | ||
|gene_id=1757 | |gene_id=1757 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_007101 | |nearest_refseq=NM_007101 | ||
|nearest_unigene=Hs.198003 | |nearest_unigene=Hs.198003 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=133739938 | |start=133739938 | ||
|start_of_center_position=133739949 | |start_of_center_position=133739949 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000298628.6 NM_007101 | + | |transcript_name=ENST00000298628.6 NM_007101 AK298348 AK316494 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103036.1 | |tss_id=hg_103036.1 | ||
Revision as of 17:17, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133739949 |
|---|---|
| End of the center position in the TSS region: | 133739950 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000298628.6 NM_007101 AK298348 AK316494 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000298628.6:0 NM_007101:0 AK298348:0 AK316494:0 AF095737:15 ENST00000371872.8:19 AF095735:19 AK223402:97 BC136363:166 BC136364:166 BC144035:166 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_007101 |
| Entrez ID: | 1757 |
| Nearest Unigene: | Hs.198003 |
| Nearest Refseq: | NM_007101 |
| Nearest Ensembl: | ENSG00000123453 |
| Gene Name: | sarcosine dehydrogenase |
| Gene Alias: | BPR-2|DMGDHL1|SAR|SARD|SDH |
| Gene Description: | sarcosine dehydrogenase |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
