Difference between revisions of "TSS:Hg 16396.1"
From referenceTSS
| Line 2: | Line 2: | ||
|DBCCR1L1= | |DBCCR1L1= | ||
|FAM5C= | |FAM5C= | ||
| − | |all_trans=ENST00000445957.2 | + | |all_trans=ENST00000445957.2:3 AK123637:51 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 11: | Line 11: | ||
|entrez_id=339479 | |entrez_id=339479 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=DBCCR1L | + | |gene_alias=DBCCR1L{{!}}DBCCR1L1{{!}}FAM5C |
|gene_description=BMP/retinoic acid inducible neural specific 3 | |gene_description=BMP/retinoic acid inducible neural specific 3 | ||
|gene_id=339479 | |gene_id=339479 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_199051 | |nearest_refseq=NM_199051 | ||
|nearest_unigene=Hs.65765 | |nearest_unigene=Hs.65765 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=190474803 | |start=190474803 | ||
|start_of_center_position=190474827 | |start_of_center_position=190474827 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000445957.2 | + | |transcript_name=ENST00000445957.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_16396.1 | |tss_id=hg_16396.1 | ||
Revision as of 16:50, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 190474827 |
|---|---|
| End of the center position in the TSS region: | 190474828 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000445957.2 |
|---|---|
| Distance: | 3 |
| Num_trans: | 2 |
| All_trans: | ENST00000445957.2:3 AK123637:51 |
TATA-Box annotation
| Distance to TSS: | 1182 |
|---|---|
| Nearest PromoterID: | NM_001317188 |
| Entrez ID: | 339479 |
| Nearest Unigene: | Hs.65765 |
| Nearest Refseq: | NM_199051 |
| Nearest Ensembl: | ENSG00000162670 |
| Gene Name: | BMP/retinoic acid inducible neural specific 3 |
| Gene Alias: | DBCCR1L|DBCCR1L1|FAM5C |
| Gene Description: | BMP/retinoic acid inducible neural specific 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
