Difference between revisions of "TSS:Hg 16402.1"
From referenceTSS
| Line 2: | Line 2: | ||
|DBCCR1L1= | |DBCCR1L1= | ||
|FAM5C= | |FAM5C= | ||
| − | |all_trans=ENST00000367462. | + | |all_trans=ENST00000367462.5:-38 NM_199051:-38 AB111893:189 AK123024:246 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance=- | + | |distance=-38 |
| − | |distance_to_tss= | + | |distance_to_tss=42 |
|end=190477826 | |end=190477826 | ||
|end_of_center_position=190477822 | |end_of_center_position=190477822 | ||
|entrez_id=339479 | |entrez_id=339479 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=DBCCR1L | + | |gene_alias=DBCCR1L{{!}}DBCCR1L1{{!}}FAM5C |
|gene_description=BMP/retinoic acid inducible neural specific 3 | |gene_description=BMP/retinoic acid inducible neural specific 3 | ||
|gene_id=339479 | |gene_id=339479 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_199051 | |nearest_refseq=NM_199051 | ||
|nearest_unigene=Hs.65765 | |nearest_unigene=Hs.65765 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=190477817 | |start=190477817 | ||
|start_of_center_position=190477821 | |start_of_center_position=190477821 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000367462. | + | |transcript_name=ENST00000367462.5 NM_199051 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_16402.1 | |tss_id=hg_16402.1 | ||
Revision as of 16:52, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 190477821 |
|---|---|
| End of the center position in the TSS region: | 190477822 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000367462.5 NM_199051 |
|---|---|
| Distance: | -38 |
| Num_trans: | 4 |
| All_trans: | ENST00000367462.5:-38 NM_199051:-38 AB111893:189 AK123024:246 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_199051 |
| Entrez ID: | 339479 |
| Nearest Unigene: | Hs.65765 |
| Nearest Refseq: | NM_199051 |
| Nearest Ensembl: | ENSG00000162670 |
| Gene Name: | BMP/retinoic acid inducible neural specific 3 |
| Gene Alias: | DBCCR1L|DBCCR1L1|FAM5C |
| Gene Description: | BMP/retinoic acid inducible neural specific 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
