Difference between revisions of "TSS:Hg 103115.1"
From referenceTSS
| Line 2: | Line 2: | ||
|KPC2= | |KPC2= | ||
|UBADC1= | |UBADC1= | ||
| − | |all_trans=ENST00000478485 | + | |all_trans=ENST00000478485.1:0 BC011822:0 DQ892567:9 KJ893030:9 DQ895782:9 CU678830:9 AF176796:-96 ENST00000371756.4:-129 NM_016172:-129 BC004967:-136 HM005604:-136 LP895632:-136 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=166 |
|end=135961244 | |end=135961244 | ||
|end_of_center_position=135961208 | |end_of_center_position=135961208 | ||
|entrez_id=10422 | |entrez_id=10422 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| − | |gene_alias=GBDR1 | + | |gene_alias=GBDR1{{!}}KPC2{{!}}UBADC1 |
|gene_description=UBA domain containing 1 | |gene_description=UBA domain containing 1 | ||
|gene_id=10422 | |gene_id=10422 | ||
| Line 17: | Line 17: | ||
|gene_source=HGNC:30221 | |gene_source=HGNC:30221 | ||
|gene_symbol=UBAC1 | |gene_symbol=UBAC1 | ||
| − | |gene_synonyms=GBDR1 | + | |gene_synonyms=GBDR1 KPC2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:30221 | |hgnc_mgi_id=HGNC:30221 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=135961207 | |start_of_center_position=135961207 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000478485 | + | |transcript_name=ENST00000478485.1 BC011822 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103115.1 | |tss_id=hg_103115.1 | ||
Revision as of 17:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 135961207 |
|---|---|
| End of the center position in the TSS region: | 135961208 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000478485.1 BC011822 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000478485.1:0 BC011822:0 DQ892567:9 KJ893030:9 DQ895782:9 CU678830:9 AF176796:-96 ENST00000371756.4:-129 NM_016172:-129 BC004967:-136 HM005604:-136 LP895632:-136 |
TATA-Box annotation
| Distance to TSS: | 166 |
|---|---|
| Nearest PromoterID: | NM_016172 |
| Entrez ID: | 10422 |
| Nearest Unigene: | Hs.9194 |
| Nearest Refseq: | NM_016172 |
| Nearest Ensembl: | ENSG00000130560 |
| Gene Name: | UBA domain containing 1 |
| Gene Alias: | GBDR1|KPC2|UBADC1 |
| Gene Description: | UBA domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
