Difference between revisions of "TSS:Hg 103125.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC014304:-70 BC111053:85 BC013282:-112 AK023162:-127 AK091349:-132 ENST00000557985.2 | + | |all_trans=BC014304:-70 BC111053:85 BC013282:-112 AK023162:-127 AK091349:-132 ENST00000557985.2:141 BC092490:141 BC021231:-151 ENST00000418388.6:-163 NR_134506:-163 NM_152833:-163 ENST00000448040.2:237 ENST00000561457.2:244 NM_001256526:244 ENST00000447934.1:401 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=-70 | |distance=-70 | ||
| − | |distance_to_tss= | + | |distance_to_tss=182 |
|end=136118712 | |end=136118712 | ||
|end_of_center_position=136118694 | |end_of_center_position=136118694 | ||
|entrez_id=90120 | |entrez_id=90120 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias= | + | |gene_alias=C9orf69 |
| − | |gene_description= | + | |gene_description=transmembrane protein 250 |
|gene_id=90120 | |gene_id=90120 | ||
| − | |gene_name= | + | |gene_name=transmembrane protein 250 |
|gene_source=HGNC:31009 | |gene_source=HGNC:31009 | ||
| − | |gene_symbol= | + | |gene_symbol=TMEM250 |
|gene_synonyms=bA83N9.1 | |gene_synonyms=bA83N9.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_152833 | |nearest_refseq=NM_152833 | ||
|nearest_unigene=Hs.287411 | |nearest_unigene=Hs.287411 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=136118674 | |start=136118674 | ||
Revision as of 17:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136118693 |
|---|---|
| End of the center position in the TSS region: | 136118694 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC014304 |
|---|---|
| Distance: | -70 |
| Num_trans: | 15 |
| All_trans: | BC014304:-70 BC111053:85 BC013282:-112 AK023162:-127 AK091349:-132 ENST00000557985.2:141 BC092490:141 BC021231:-151 ENST00000418388.6:-163 NR_134506:-163 NM_152833:-163 ENST00000448040.2:237 ENST00000561457.2:244 NM_001256526:244 ENST00000447934.1:401 |
TATA-Box annotation
| Distance to TSS: | 182 |
|---|---|
| Nearest PromoterID: | NR_134506 |
| Entrez ID: | 90120 |
| Nearest Unigene: | Hs.287411 |
| Nearest Refseq: | NM_152833 |
| Nearest Ensembl: | ENSG00000238227 |
| Gene Name: | transmembrane protein 250 |
| Gene Alias: | C9orf69 |
| Gene Description: | transmembrane protein 250 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
