Difference between revisions of "TSS:Hg 103128.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000418388. | + | |all_trans=ENST00000418388.6:0 NR_134506:0 NM_152833:0 BC021231:0 AK091349:7 AK023162:12 BC013282:27 BC014304:69 BC111053:261 ENST00000557985.2:317 BC092490:317 ENST00000448040.2:413 ENST00000561457.2:420 NM_001256526:420 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-9 |
|end=136118918 | |end=136118918 | ||
|end_of_center_position=136118885 | |end_of_center_position=136118885 | ||
|entrez_id=90120 | |entrez_id=90120 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias= | + | |gene_alias=C9orf69 |
| − | |gene_description= | + | |gene_description=transmembrane protein 250 |
|gene_id=90120 | |gene_id=90120 | ||
| − | |gene_name= | + | |gene_name=transmembrane protein 250 |
|gene_source=HGNC:31009 | |gene_source=HGNC:31009 | ||
| − | |gene_symbol= | + | |gene_symbol=TMEM250 |
|gene_synonyms=bA83N9.1 | |gene_synonyms=bA83N9.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:31009 | |hgnc_mgi_id=HGNC:31009 | ||
|nearest_ensembl=ENSG00000238227 | |nearest_ensembl=ENSG00000238227 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_152833 |
|nearest_refseq=NM_152833 | |nearest_refseq=NM_152833 | ||
|nearest_unigene=Hs.287411 | |nearest_unigene=Hs.287411 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=136118850 | |start=136118850 | ||
|start_of_center_position=136118884 | |start_of_center_position=136118884 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000418388. | + | |transcript_name=ENST00000418388.6 NR_134506 NM_152833 BC021231 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103128.1 | |tss_id=hg_103128.1 | ||
Revision as of 17:19, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136118884 |
|---|---|
| End of the center position in the TSS region: | 136118885 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000418388.6 NR_134506 NM_152833 BC021231 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000418388.6:0 NR_134506:0 NM_152833:0 BC021231:0 AK091349:7 AK023162:12 BC013282:27 BC014304:69 BC111053:261 ENST00000557985.2:317 BC092490:317 ENST00000448040.2:413 ENST00000561457.2:420 NM_001256526:420 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_152833 |
| Entrez ID: | 90120 |
| Nearest Unigene: | Hs.287411 |
| Nearest Refseq: | NM_152833 |
| Nearest Ensembl: | ENSG00000238227 |
| Gene Name: | transmembrane protein 250 |
| Gene Alias: | C9orf69 |
| Gene Description: | transmembrane protein 250 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
